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Genome aliquoting revisited
Robert Warren
,
David Sankoff
LNCS/LNBI
6398
, 2010, pp. 1-12
The problem of chromosome reincorporation in DCJ sorting and halving
Jakub Kovác̑
,
Marília D.V. Braga
,
Jens Stoye
LNCS/LNBI
6398
, 2010, pp. 13-24
Advances on genome duplication distances
Yves Gagnon
,
Olivier Tremblay Savard
,
Denis Bertrand
,
Nadia El-Mabrouk
LNCS/LNBI
6398
, 2010, pp. 25-38
Listing all parsimonious reversal sequences: New algorithms and perspectives
Ghada Badr
,
Krister M. Swenson
,
David Sankoff
LNCS/LNBI
6398
, 2010, pp. 39-49
Ultra-perfect sorting scenarios
Aïda Ouangraoua
,
Anne Bergeron
,
Krister M. Swenson
LNCS/LNBI
6398
, 2010, pp. 50-61
On sorting genomes with DCJ and indels
Marília D.V. Braga
LNCS/LNBI
6398
, 2010, pp. 62-73
The zero exemplar distance problem
Minghui Jiang
LNCS/LNBI
6398
, 2010, pp. 74-82
Scaffold filling under the breakpoint distance
Haitao Jiang
,
Chunfang Zheng
,
David Sankoff
,
Binhai Zhu
LNCS/LNBI
6398
, 2010, pp. 83-92
An efficient algorithm for gene/species trees parsimonious reconciliation with losses, duplications and transfers
Jean-Philippe Doyon
,
Celine Scornavacca
,
K.Yu. Gorbunov
,
Gergely J. Szöllŏsi
,
Vincent Ranwez
,
Vincent Berry
LNCS/LNBI
6398
, 2010, pp. 93-108
Detecting highways of horizontal gene transfer
Mukul S. Bansal
,
J. Peter Gogarten
,
Ron Shamir
LNCS/LNBI
6398
, 2010, pp. 109-120
On exploring genome rearrangement phylogenetic patterns
Andrew Wei Xu
LNCS/LNBI
6398
, 2010, pp. 121-136
Fast and accurate phylogenetic reconstruction from high-resolution whole-genome data and a novel robustness estimator
Yu Lin
,
Vaibhav Rajan
,
Bernard M.E. Moret
LNCS/LNBI
6398
, 2010, pp. 137-148
A simple measure of the dynamics of segmented genomes: An application to influenza
Stéphane Aris-Brosou
LNCS/LNBI
6398
, 2010, pp. 149-160
Novel definition and algorithm for chaining fragments with proportional overlaps
Raluca Uricaru
,
Alban Mancheron
,
Eric Rivals
LNCS/LNBI
6398
, 2010, pp. 161-172
Assessing the robustness of complete bacterial genome segmentations
Hugo Devillers
,
Hélène Chiapello
,
Sophie Schbath
,
Meriem El Karoui
LNCS/LNBI
6398
, 2010, pp. 173-187
An algorithm to solve the motif alignment problem for approximate nested tandem repeats
Atheer A. Matroud
,
Michael D. Hendy
,
Christopher P. Tuffley
LNCS/LNBI
6398
, 2010, pp. 188-197
Limited lifespan of fragile regions in mammalian evolution
Max A. Alekseyev
,
Pavel A. Pevzner
LNCS/LNBI
6398
, 2010, pp. 198-215
Mapping association between long-range cis-regulatory regions and their target genes using comparative genomics
Emmanuel Mongin
,
Ken Dewar
,
Mathieu Blanchette
LNCS/LNBI
6398
, 2010, pp. 216-227
A new genomic evolutionary model for rearrangements, duplications, and losses that applies across eukaryotes and prokaryotes
Yu Lin
,
Bernard M.E. Moret
LNCS/LNBI
6398
, 2010, pp. 228-239
A simulation tool for the study of symmetric inversions in bacterial genomes
Ulisses Dias
,
Zanoni Dias
,
João C. Setubal
LNCS/LNBI
6398
, 2010, pp. 240-251
Consistency of sequence-based gene clusters
Roland Wittler
,
Jens Stoye
LNCS/LNBI
6398
, 2010, pp. 252-263
Efficient computation of approximate gene clusters based on reference occurrences
Katharina Jahn
LNCS/LNBI
6398
, 2010, pp. 264-277
The complexity of the gapped consecutive-ones property problem for matrices of bounded maximum degree
Ján Man̑uch
,
Murray Patterson
LNCS/LNBI
6398
, 2010, pp. 278-289
An approximation algorithm for computing a parsimonious first speciation in the gene duplication model
Aïda Ouangraoua
,
Krister M. Swenson
,
Cedric Chauve
LNCS/LNBI
6398
, 2010, pp. 290-301