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Shared peptides in mass spectrometry based protein quantification
Banu Dost
,
Nuno Bandeira
,
Xiangqian Li
,
Zhouxin Shen
,
Steve Briggs
,
Vineet Bafna
LNCS/LNBI
5541
, 2009, pp. 356-371
Evaluating between-pathway models with expression data
Benjamin J. Hescott
,
Mark D.M. Leiserson
,
Lenore J. Cowen
,
Donna K. Slonim
LNCS/LNBI
5541
, 2009, pp. 372-385
Sorting signed permutations by inversions in
O(n\log n)
time
Krister M. Swenson
,
Vaibhav Rajan
,
Yu Lin
,
Bernard M.E. Moret
LNCS/LNBI
5541
, 2009, pp. 386-399
Finding biologically accurate clusterings in hierarchical tree decompositions using the variation of information
Saket Navlakha
,
James White
,
Niranjan Nagarajan
,
Mihai Pop
,
Carl Kingsford
LNCS/LNBI
5541
, 2009, pp. 400-417
Identification and frequency estimation of inversion polymorphisms from haplotype data
Suzanne S. Sindi
,
Benjamin J. Raphael
LNCS/LNBI
5541
, 2009, pp. 418-433
On the relationship between DNA periodicity and local chromatin structure
Sheila M. Reynolds
,
Jeff A. Bilmes
,
William Stafford Noble
LNCS/LNBI
5541
, 2009, pp. 434-450
Phylogenies without branch bounds: Contracting the short, pruning the deep
Constantinos Daskalakis
,
Elchanan Mossel
,
Sebastien Roch
LNCS/LNBI
5541
, 2009, pp. 451-465
Detecting the presence and absence of causal relationships between expression of yeast genes with very few samples
Eun Yong Kang
,
Ilya Shpitser
,
Chun Ye
,
Eleazar Eskin
LNCS/LNBI
5541
, 2009, pp. 466-481
An adaptive and memory efficient algorithm for genotype imputation
Hyun Min Kang
,
Noah A. Zaitlen
,
Buhm Han
,
Eleazar Eskin
LNCS/LNBI
5541
, 2009, pp. 482-495
A statistical framework for the functional analysis of metagenomes
Itai Sharon
,
Amrita Pati
,
Victor M. Markowitz
,
Ron Y. Pinter
LNCS/LNBI
5541
, 2009, pp. 496-511
Learning models for aligning protein sequences with predicted secondary structure
Eagu Kim
,
Travis Wheeler
,
John Kececioglu
LNCS/LNBI
5541
, 2009, pp. 512-531
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