@incollection{Baeza-Yates-Navarro/96, AUTHOR = {Baeza-Yates, Ricardo and Navarro, Gonzalo}, TITLE = {A faster algorithm for approximate string matching}, BOOKTITLE = {Proceedings of the 7th Annual Symposium on Combinatorial Pattern Matching, CPM'96 (Laguna Beach, California, June 10-12, 1996)}, SERIES = {LNCS}, VOLUME = {1075}, PAGES = {1-23}, YEAR = {1996}, EDITOR = {Hirschberg, Dan and Myers, Gene}, PUBLISHER = {Springer-Verlag}, ADDRESS = {Berlin-Heidelberg-New York-London-Paris-Tokyo-Hong Kong-Barcelona-Budapest}, } @incollection{El-Mabrouk-Crochemore/96, AUTHOR = {El-Mabrouk, Nadia and Crochemore, Maxime}, TITLE = {Boyer-Moore strategy to efficient approximate string matching}, BOOKTITLE = {Proceedings of the 7th Annual Symposium on Combinatorial Pattern Matching, CPM'96 (Laguna Beach, California, June 10-12, 1996)}, SERIES = {LNCS}, VOLUME = {1075}, PAGES = {24-38}, YEAR = {1996}, EDITOR = {Hirschberg, Dan and Myers, Gene}, PUBLISHER = {Springer-Verlag}, ADDRESS = {Berlin-Heidelberg-New York-London-Paris-Tokyo-Hong Kong-Barcelona-Budapest}, } @incollection{Gasieniec-Karpinski-Plandowski-Rytter/96, AUTHOR = {G{\c{a}}sieniec, Leszek and Karpinski, Marek and Plandowski, Wojciech and Rytter, Wojciech}, TITLE = {Randomized efficient algorithms for compressed strings: The finger-print approach}, BOOKTITLE = {Proceedings of the 7th Annual Symposium on Combinatorial Pattern Matching, CPM'96 (Laguna Beach, California, June 10-12, 1996)}, SERIES = {LNCS}, VOLUME = {1075}, PAGES = {39-49}, YEAR = {1996}, EDITOR = {Hirschberg, Dan and Myers, Gene}, PUBLISHER = {Springer-Verlag}, ADDRESS = {Berlin-Heidelberg-New York-London-Paris-Tokyo-Hong Kong-Barcelona-Budapest}, } @incollection{Sutinen-Tarhio/96, AUTHOR = {Sutinen, Erkki and Tarhio, Jorma}, TITLE = {Filtration with $q$-samples in approximate string matching}, BOOKTITLE = {Proceedings of the 7th Annual Symposium on Combinatorial Pattern Matching, CPM'96 (Laguna Beach, California, June 10-12, 1996)}, SERIES = {LNCS}, VOLUME = {1075}, PAGES = {50-63}, YEAR = {1996}, EDITOR = {Hirschberg, Dan and Myers, Gene}, PUBLISHER = {Springer-Verlag}, ADDRESS = {Berlin-Heidelberg-New York-London-Paris-Tokyo-Hong Kong-Barcelona-Budapest}, } @incollection{Lipman/96, AUTHOR = {Lipman, David J.}, TITLE = {Computing discoveries in molecular biology}, BOOKTITLE = {Proceedings of the 7th Annual Symposium on Combinatorial Pattern Matching, CPM'96 (Laguna Beach, California, June 10-12, 1996)}, SERIES = {LNCS}, VOLUME = {1075}, PAGES = {64-64}, YEAR = {1996}, EDITOR = {Hirschberg, Dan and Myers, Gene}, PUBLISHER = {Springer-Verlag}, ADDRESS = {Berlin-Heidelberg-New York-London-Paris-Tokyo-Hong Kong-Barcelona-Budapest}, } @incollection{Brodal-Gasieniec/96, AUTHOR = {Brodal, Gerth St{\o}lting and G{\c{a}}sieniec, Leszek}, TITLE = {Approximate dictionary queries}, BOOKTITLE = {Proceedings of the 7th Annual Symposium on Combinatorial Pattern Matching, CPM'96 (Laguna Beach, California, June 10-12, 1996)}, SERIES = {LNCS}, VOLUME = {1075}, PAGES = {65-74}, YEAR = {1996}, EDITOR = {Hirschberg, Dan and Myers, Gene}, PUBLISHER = {Springer-Verlag}, ADDRESS = {Berlin-Heidelberg-New York-London-Paris-Tokyo-Hong Kong-Barcelona-Budapest}, } @incollection{Muth-Manber/96, AUTHOR = {Muth, Robert and Manber, Udi}, TITLE = {Approximate multiple string search}, BOOKTITLE = {Proceedings of the 7th Annual Symposium on Combinatorial Pattern Matching, CPM'96 (Laguna Beach, California, June 10-12, 1996)}, SERIES = {LNCS}, VOLUME = {1075}, PAGES = {75-86}, YEAR = {1996}, EDITOR = {Hirschberg, Dan and Myers, Gene}, PUBLISHER = {Springer-Verlag}, ADDRESS = {Berlin-Heidelberg-New York-London-Paris-Tokyo-Hong Kong-Barcelona-Budapest}, } @incollection{Armen-Stein/96, AUTHOR = {Armen, Chris and Stein, Clifford}, TITLE = {A 2$\frac{2}{3}$-approximation algorithm for the shortest superstring problem}, BOOKTITLE = {Proceedings of the 7th Annual Symposium on Combinatorial Pattern Matching, CPM'96 (Laguna Beach, California, June 10-12, 1996)}, SERIES = {LNCS}, VOLUME = {1075}, PAGES = {87-101}, YEAR = {1996}, EDITOR = {Hirschberg, Dan and Myers, Gene}, PUBLISHER = {Springer-Verlag}, ADDRESS = {Berlin-Heidelberg-New York-London-Paris-Tokyo-Hong Kong-Barcelona-Budapest}, } @incollection{Andersson-Larsson-Swanson/96, AUTHOR = {Andersson, Arne and Larsson, N. Jesper and Swanson, Kurt}, TITLE = {Suffix trees on words}, BOOKTITLE = {Proceedings of the 7th Annual Symposium on Combinatorial Pattern Matching, CPM'96 (Laguna Beach, California, June 10-12, 1996)}, SERIES = {LNCS}, VOLUME = {1075}, PAGES = {102-115}, YEAR = {1996}, EDITOR = {Hirschberg, Dan and Myers, Gene}, PUBLISHER = {Springer-Verlag}, ADDRESS = {Berlin-Heidelberg-New York-London-Paris-Tokyo-Hong Kong-Barcelona-Budapest}, } @incollection{Breslauer/96a, AUTHOR = {Breslauer, Dany}, TITLE = {The suffix tree of a tree and minimizing sequential transducers}, BOOKTITLE = {Proceedings of the 7th Annual Symposium on Combinatorial Pattern Matching, CPM'96 (Laguna Beach, California, June 10-12, 1996)}, SERIES = {LNCS}, VOLUME = {1075}, PAGES = {116-129}, YEAR = {1996}, EDITOR = {Hirschberg, Dan and Myers, Gene}, PUBLISHER = {Springer-Verlag}, ADDRESS = {Berlin-Heidelberg-New York-London-Paris-Tokyo-Hong Kong-Barcelona-Budapest}, } @incollection{Farach-Muthukrishnan/96, AUTHOR = {Farach, Martin and Muthukrishnan, S.}, TITLE = {Perfect hashing for strings: Formalization and algorithms}, BOOKTITLE = {Proceedings of the 7th Annual Symposium on Combinatorial Pattern Matching, CPM'96 (Laguna Beach, California, June 10-12, 1996)}, SERIES = {LNCS}, VOLUME = {1075}, PAGES = {130-140}, YEAR = {1996}, EDITOR = {Hirschberg, Dan and Myers, Gene}, PUBLISHER = {Springer-Verlag}, ADDRESS = {Berlin-Heidelberg-New York-London-Paris-Tokyo-Hong Kong-Barcelona-Budapest}, } @incollection{Gelfand-Mironov-Pevzner/96, AUTHOR = {Gelfand, Mikhail S. and Mironov, Andrey A. and Pevzner, Pavel A.}, TITLE = {Spliced alignment: A new approach to gene recognition}, BOOKTITLE = {Proceedings of the 7th Annual Symposium on Combinatorial Pattern Matching, CPM'96 (Laguna Beach, California, June 10-12, 1996)}, SERIES = {LNCS}, VOLUME = {1075}, PAGES = {141-158}, YEAR = {1996}, EDITOR = {Hirschberg, Dan and Myers, Gene}, PUBLISHER = {Springer-Verlag}, ADDRESS = {Berlin-Heidelberg-New York-London-Paris-Tokyo-Hong Kong-Barcelona-Budapest}, } @incollection{Ferretti-Nadeau-Sankoff/96, AUTHOR = {Ferretti, Vincent and Nadeau, Joseph H. and Sankoff, David}, TITLE = {Original synteny}, BOOKTITLE = {Proceedings of the 7th Annual Symposium on Combinatorial Pattern Matching, CPM'96 (Laguna Beach, California, June 10-12, 1996)}, SERIES = {LNCS}, VOLUME = {1075}, PAGES = {159-167}, YEAR = {1996}, EDITOR = {Hirschberg, Dan and Myers, Gene}, PUBLISHER = {Springer-Verlag}, ADDRESS = {Berlin-Heidelberg-New York-London-Paris-Tokyo-Hong Kong-Barcelona-Budapest}, } @incollection{Berman-Hannenhalli/96, AUTHOR = {Berman, Piotr and Hannenhalli, Sridhar}, TITLE = {Fast sorting by reversal}, BOOKTITLE = {Proceedings of the 7th Annual Symposium on Combinatorial Pattern Matching, CPM'96 (Laguna Beach, California, June 10-12, 1996)}, SERIES = {LNCS}, VOLUME = {1075}, PAGES = {168-185}, YEAR = {1996}, EDITOR = {Hirschberg, Dan and Myers, Gene}, PUBLISHER = {Springer-Verlag}, ADDRESS = {Berlin-Heidelberg-New York-London-Paris-Tokyo-Hong Kong-Barcelona-Budapest}, } @incollection{Sagot-Viari/96, AUTHOR = {Sagot, Marie-France and Viari, Alain}, TITLE = {A double combinatorial approach to discovering patterns in biological sequences}, BOOKTITLE = {Proceedings of the 7th Annual Symposium on Combinatorial Pattern Matching, CPM'96 (Laguna Beach, California, June 10-12, 1996)}, SERIES = {LNCS}, VOLUME = {1075}, PAGES = {186-208}, YEAR = {1996}, EDITOR = {Hirschberg, Dan and Myers, Gene}, PUBLISHER = {Springer-Verlag}, ADDRESS = {Berlin-Heidelberg-New York-London-Paris-Tokyo-Hong Kong-Barcelona-Budapest}, } @incollection{Arratia-Reinert/96, AUTHOR = {Arratia, Richard and Reinert, Gesine}, TITLE = {Poisson process approximation for repeats in one sequence and its application to sequencing by hybridization}, BOOKTITLE = {Proceedings of the 7th Annual Symposium on Combinatorial Pattern Matching, CPM'96 (Laguna Beach, California, June 10-12, 1996)}, SERIES = {LNCS}, VOLUME = {1075}, PAGES = {209-219}, YEAR = {1996}, EDITOR = {Hirschberg, Dan and Myers, Gene}, PUBLISHER = {Springer-Verlag}, ADDRESS = {Berlin-Heidelberg-New York-London-Paris-Tokyo-Hong Kong-Barcelona-Budapest}, } @incollection{Wang-Gusfield/96, AUTHOR = {Wang, Lusheng and Gusfield, Dan}, TITLE = {Improved approximation algorithms for tree alignment}, BOOKTITLE = {Proceedings of the 7th Annual Symposium on Combinatorial Pattern Matching, CPM'96 (Laguna Beach, California, June 10-12, 1996)}, SERIES = {LNCS}, VOLUME = {1075}, PAGES = {220-233}, YEAR = {1996}, EDITOR = {Hirschberg, Dan and Myers, Gene}, PUBLISHER = {Springer-Verlag}, ADDRESS = {Berlin-Heidelberg-New York-London-Paris-Tokyo-Hong Kong-Barcelona-Budapest}, } @incollection{Phillips-Warnow/96a, AUTHOR = {Phillips, Cynthia A. and Warnow, Tandy J.}, TITLE = {The asymmetric median tree --- A new model for building consensus trees}, BOOKTITLE = {Proceedings of the 7th Annual Symposium on Combinatorial Pattern Matching, CPM'96 (Laguna Beach, California, June 10-12, 1996)}, SERIES = {LNCS}, VOLUME = {1075}, PAGES = {234-252}, YEAR = {1996}, EDITOR = {Hirschberg, Dan and Myers, Gene}, PUBLISHER = {Springer-Verlag}, ADDRESS = {Berlin-Heidelberg-New York-London-Paris-Tokyo-Hong Kong-Barcelona-Budapest}, } @incollection{Goldberg-Goldberg-Phillips-Sorkin/96, AUTHOR = {Goldberg, Leslie Ann and Goldberg, Paul W. and Phillips, Cynthia A. and Sorkin, Gregory B.}, TITLE = {Constructing computer virus phylogenies}, BOOKTITLE = {Proceedings of the 7th Annual Symposium on Combinatorial Pattern Matching, CPM'96 (Laguna Beach, California, June 10-12, 1996)}, SERIES = {LNCS}, VOLUME = {1075}, PAGES = {253-270}, YEAR = {1996}, EDITOR = {Hirschberg, Dan and Myers, Gene}, PUBLISHER = {Springer-Verlag}, ADDRESS = {Berlin-Heidelberg-New York-London-Paris-Tokyo-Hong Kong-Barcelona-Budapest}, } @incollection{Sandak-Nussinov-Wolfson/96, AUTHOR = {Sandak, Bilha and Nussinov, Ruth and Wolfson, Haim J.}, TITLE = {Docking of conformationally flexible proteins}, BOOKTITLE = {Proceedings of the 7th Annual Symposium on Combinatorial Pattern Matching, CPM'96 (Laguna Beach, California, June 10-12, 1996)}, SERIES = {LNCS}, VOLUME = {1075}, PAGES = {271-287}, YEAR = {1996}, EDITOR = {Hirschberg, Dan and Myers, Gene}, PUBLISHER = {Springer-Verlag}, ADDRESS = {Berlin-Heidelberg-New York-London-Paris-Tokyo-Hong Kong-Barcelona-Budapest}, } @incollection{Hart-Istrail/96, AUTHOR = {Hart, William E. and Istrail, Sorin}, TITLE = {Invariant patterns in crystal lattices: Implications for protein folding algorithms}, BOOKTITLE = {Proceedings of the 7th Annual Symposium on Combinatorial Pattern Matching, CPM'96 (Laguna Beach, California, June 10-12, 1996)}, SERIES = {LNCS}, VOLUME = {1075}, PAGES = {288-303}, YEAR = {1996}, EDITOR = {Hirschberg, Dan and Myers, Gene}, PUBLISHER = {Springer-Verlag}, ADDRESS = {Berlin-Heidelberg-New York-London-Paris-Tokyo-Hong Kong-Barcelona-Budapest}, } @incollection{Gusfield-Karp-Wang-Stelling/96, AUTHOR = {Gusfield, Dan and Karp, Richard and Wang, Lusheng and Stelling, Paul}, TITLE = {Graph traversals, genes, and matroids: An efficient case of the Travelling Salesman problem}, BOOKTITLE = {Proceedings of the 7th Annual Symposium on Combinatorial Pattern Matching, CPM'96 (Laguna Beach, California, June 10-12, 1996)}, SERIES = {LNCS}, VOLUME = {1075}, PAGES = {304-319}, YEAR = {1996}, EDITOR = {Hirschberg, Dan and Myers, Gene}, PUBLISHER = {Springer-Verlag}, ADDRESS = {Berlin-Heidelberg-New York-London-Paris-Tokyo-Hong Kong-Barcelona-Budapest}, } @incollection{Amir-Calinescu/96, AUTHOR = {Amir, Amihood and Calinescu, Gruia}, TITLE = {Alphabet independent and dictionary scaled matching}, BOOKTITLE = {Proceedings of the 7th Annual Symposium on Combinatorial Pattern Matching, CPM'96 (Laguna Beach, California, June 10-12, 1996)}, SERIES = {LNCS}, VOLUME = {1075}, PAGES = {320-334}, YEAR = {1996}, EDITOR = {Hirschberg, Dan and Myers, Gene}, PUBLISHER = {Springer-Verlag}, ADDRESS = {Berlin-Heidelberg-New York-London-Paris-Tokyo-Hong Kong-Barcelona-Budapest}, } @incollection{Park/96a, AUTHOR = {Park, Kunsoo}, TITLE = {Analysis of two-dimensional approximate pattern matching algorithms}, BOOKTITLE = {Proceedings of the 7th Annual Symposium on Combinatorial Pattern Matching, CPM'96 (Laguna Beach, California, June 10-12, 1996)}, SERIES = {LNCS}, VOLUME = {1075}, PAGES = {335-347}, YEAR = {1996}, EDITOR = {Hirschberg, Dan and Myers, Gene}, PUBLISHER = {Springer-Verlag}, ADDRESS = {Berlin-Heidelberg-New York-London-Paris-Tokyo-Hong Kong-Barcelona-Budapest}, } @incollection{Arikati-Dessmark-Lingas-Marathe/96, AUTHOR = {Arikati, Srinivasa R. and Dessmark, Anders and Lingas, Andrzej and Marathe, Madhav}, TITLE = {Approximation algorithms for maximum two-dimensional pattern matching}, BOOKTITLE = {Proceedings of the 7th Annual Symposium on Combinatorial Pattern Matching, CPM'96 (Laguna Beach, California, June 10-12, 1996)}, SERIES = {LNCS}, VOLUME = {1075}, PAGES = {348-360}, YEAR = {1996}, EDITOR = {Hirschberg, Dan and Myers, Gene}, PUBLISHER = {Springer-Verlag}, ADDRESS = {Berlin-Heidelberg-New York-London-Paris-Tokyo-Hong Kong-Barcelona-Budapest}, } @incollection{Zhang/96c, AUTHOR = {Zhang, Kaizhong}, TITLE = {Efficient parallel algorithms for tree editing problems}, BOOKTITLE = {Proceedings of the 7th Annual Symposium on Combinatorial Pattern Matching, CPM'96 (Laguna Beach, California, June 10-12, 1996)}, SERIES = {LNCS}, VOLUME = {1075}, PAGES = {361-372}, YEAR = {1996}, EDITOR = {Hirschberg, Dan and Myers, Gene}, PUBLISHER = {Springer-Verlag}, ADDRESS = {Berlin-Heidelberg-New York-London-Paris-Tokyo-Hong Kong-Barcelona-Budapest}, } @incollection{Fu/96, AUTHOR = {Fu, James J.}, TITLE = {Approximate pattern matching in directed graphs}, BOOKTITLE = {Proceedings of the 7th Annual Symposium on Combinatorial Pattern Matching, CPM'96 (Laguna Beach, California, June 10-12, 1996)}, SERIES = {LNCS}, VOLUME = {1075}, PAGES = {373-383}, YEAR = {1996}, EDITOR = {Hirschberg, Dan and Myers, Gene}, PUBLISHER = {Springer-Verlag}, ADDRESS = {Berlin-Heidelberg-New York-London-Paris-Tokyo-Hong Kong-Barcelona-Budapest}, } @incollection{Bodlaender-Fellows-Evans/96, AUTHOR = {Bodlaender, Hans L. and Fellows, Michael R. and Evans, Patricia A.}, TITLE = {Finite-state computability of annotations of strings and trees}, BOOKTITLE = {Proceedings of the 7th Annual Symposium on Combinatorial Pattern Matching, CPM'96 (Laguna Beach, California, June 10-12, 1996)}, SERIES = {LNCS}, VOLUME = {1075}, PAGES = {384-391}, YEAR = {1996}, EDITOR = {Hirschberg, Dan and Myers, Gene}, PUBLISHER = {Springer-Verlag}, ADDRESS = {Berlin-Heidelberg-New York-London-Paris-Tokyo-Hong Kong-Barcelona-Budapest}, }