@article{Cardelli/08a, AUTHOR = {Cardelli, Luca}, TITLE = {Bitonal membrane systems --- Interactions of biological membranes}, JOURNAL = {Theor.~Comput.~Sci.}, VOLUME = {404}, NUMBER = {1-2}, PAGES = {5-18}, YEAR = {2008}, EDITOR = {Ausiello, G. and Sannella, D.}, KEYWORDS = {membrane computing, process algebra, endocytosis, bitonality}, URL = {http://www.sciencedirect.com/science/article/B6V1G-4S85DRX-1/2/9650d8c9d6e41568a72f5825fe301e76}, PUBLISHER = {Elsevier B.V.}, ADDRESS = {Amsterdam-Boston-Jena-London-New York-Oxford-Paris-Philadelphia-San Diego-St. Louis}, } @article{Paun/08, AUTHOR = {P{\u{a}}un, Gheorghe}, TITLE = {Membrane computing and brane calculi. Old, new, and future bridges}, JOURNAL = {Theor.~Comput.~Sci.}, VOLUME = {404}, NUMBER = {1-2}, PAGES = {19-25}, YEAR = {2008}, EDITOR = {Ausiello, G. and Sannella, D.}, KEYWORDS = {membrane computing, p systems, brane calculi, turing computability}, URL = {http://www.sciencedirect.com/science/article/B6V1G-4S6P257-2/2/c5da32a3f68de5ef81888a52c27a9eae}, PUBLISHER = {Elsevier B.V.}, ADDRESS = {Amsterdam-Boston-Jena-London-New York-Oxford-Paris-Philadelphia-San Diego-St. Louis}, } @article{Brijder-Cavaliere-Riscos-Nunez-Rozenberg-Sburlan/08, AUTHOR = {Brijder, Robert and Cavaliere, Matteo and Riscos-N{\'u}{\~n}ez, Agust{\'{i}}n and Rozenberg, Grzegorz and Sburlan, Drago{\c{s}}}, TITLE = {Membrane systems with proteins embedded in membranes}, JOURNAL = {Theor.~Comput.~Sci.}, VOLUME = {404}, NUMBER = {1-2}, PAGES = {26-39}, YEAR = {2008}, EDITOR = {Ausiello, G. and Sannella, D.}, URL = {http://www.sciencedirect.com/science/article/B6V1G-4S6P257-1/2/2120747a2efab68c5db9458fefd2cbee}, PUBLISHER = {Elsevier B.V.}, ADDRESS = {Amsterdam-Boston-Jena-London-New York-Oxford-Paris-Philadelphia-San Diego-St. Louis}, } @article{Cavaliere-Sedwards/08, AUTHOR = {Cavaliere, Matteo and Sedwards, Sean}, TITLE = {Decision problems in membrane systems with peripheral proteins, transport and evolution}, JOURNAL = {Theor.~Comput.~Sci.}, VOLUME = {404}, NUMBER = {1-2}, PAGES = {40-51}, YEAR = {2008}, EDITOR = {Ausiello, G. and Sannella, D.}, KEYWORDS = {membrane systems, peripheral proteins, systems biology}, URL = {http://www.sciencedirect.com/science/article/B6V1G-4S6P257-7/2/8d414d720cf9846890a9252db6bc2761}, PUBLISHER = {Elsevier B.V.}, ADDRESS = {Amsterdam-Boston-Jena-London-New York-Oxford-Paris-Philadelphia-San Diego-St. Louis}, } @article{Csuhaj-Varju-Vaszil/08, AUTHOR = {Csuhaj-Varj{\'u}, Erzs{\'e}bet and Vaszil, Gy{\"o}rgy}, TITLE = {(Mem)brane automata}, JOURNAL = {Theor.~Comput.~Sci.}, VOLUME = {404}, NUMBER = {1-2}, PAGES = {52-60}, YEAR = {2008}, EDITOR = {Ausiello, G. and Sannella, D.}, KEYWORDS = {p systems, brane calculi, p automata, computational completeness}, URL = {http://www.sciencedirect.com/science/article/B6V1G-4S6P257-3/2/de847a149a7b814fa7532a51b949f38e}, PUBLISHER = {Elsevier B.V.}, ADDRESS = {Amsterdam-Boston-Jena-London-New York-Oxford-Paris-Philadelphia-San Diego-St. Louis}, } @article{Curien-Danos-Krivine-Zhang/08, AUTHOR = {Curien, Pierre-Louis and Danos, Vincent and Krivine, Jean and Zhang, Min}, TITLE = {Computational self-assembly}, JOURNAL = {Theor.~Comput.~Sci.}, VOLUME = {404}, NUMBER = {1-2}, PAGES = {61-75}, YEAR = {2008}, EDITOR = {Ausiello, G. and Sannella, D.}, URL = {http://www.sciencedirect.com/science/article/B6V1G-4S80XN0-1/2/f0b4ea01fd14b8f30d4686ced340f964}, PUBLISHER = {Elsevier B.V.}, ADDRESS = {Amsterdam-Boston-Jena-London-New York-Oxford-Paris-Philadelphia-San Diego-St. Louis}, } @article{Diaz-Pernil-Gutierrez-Naranjo-Perez-Jimenez-Riscos-Nunez/08, AUTHOR = {D{\'{i}}az-Pernil, Daniel and Guti{\'e}rrez-Naranjo, Miguel A. and P{\'e}rez-Jim{\'e}nez, Mario J. and Riscos-N{\'u}{\~n}ez, Agust{\'{i}}n}, TITLE = {A uniform family of tissue P systems with cell division solving 3-COL in a linear time}, JOURNAL = {Theor.~Comput.~Sci.}, VOLUME = {404}, NUMBER = {1-2}, PAGES = {76-87}, YEAR = {2008}, EDITOR = {Ausiello, G. and Sannella, D.}, KEYWORDS = {membrane computing, tissue p systems, cell division, 3-coloring problem}, URL = {http://www.sciencedirect.com/science/article/B6V1G-4S6P257-8/2/e36b2f7bd12a23c5c0d534322365756c}, PUBLISHER = {Elsevier B.V.}, ADDRESS = {Amsterdam-Boston-Jena-London-New York-Oxford-Paris-Philadelphia-San Diego-St. Louis}, } @article{Franco-Margenstern/08, AUTHOR = {Franco, Giuditta and Margenstern, Maurice}, TITLE = {A DNA computing inspired computational model}, JOURNAL = {Theor.~Comput.~Sci.}, VOLUME = {404}, NUMBER = {1-2}, PAGES = {88-96}, YEAR = {2008}, EDITOR = {Ausiello, G. and Sannella, D.}, KEYWORDS = {dna computing, double string structure, membrane systems, register machine program}, URL = {http://www.sciencedirect.com/science/article/B6V1G-4S80XN0-2/2/bdb8f5e8279838d4af40a150b7126a70}, PUBLISHER = {Elsevier B.V.}, ADDRESS = {Amsterdam-Boston-Jena-London-New York-Oxford-Paris-Philadelphia-San Diego-St. Louis}, } @article{Geisweiller-Hillston-Stenico/08, AUTHOR = {Geisweiller, Nil and Hillston, Jane and Stenico, Marco}, TITLE = {Relating continuous and discrete PEPA models of signalling pathways}, JOURNAL = {Theor.~Comput.~Sci.}, VOLUME = {404}, NUMBER = {1-2}, PAGES = {97-111}, YEAR = {2008}, EDITOR = {Ausiello, G. and Sannella, D.}, KEYWORDS = {pepa, odes, ctmc, kurtz}, URL = {http://www.sciencedirect.com/science/article/B6V1G-4S7J5P1-1/2/510a279b8f206f83e8f4aee549d5b708}, PUBLISHER = {Elsevier B.V.}, ADDRESS = {Amsterdam-Boston-Jena-London-New York-Oxford-Paris-Philadelphia-San Diego-St. Louis}, } @article{Kleijn-Koutny/08, AUTHOR = {Kleijn, Jetty and Koutny, Maciej}, TITLE = {Processes of membrane systems with promoters and inhibitors}, JOURNAL = {Theor.~Comput.~Sci.}, VOLUME = {404}, NUMBER = {1-2}, PAGES = {112-126}, YEAR = {2008}, EDITOR = {Ausiello, G. and Sannella, D.}, KEYWORDS = {membrane system, promoter, inhibitor, petri net, locality}, URL = {http://www.sciencedirect.com/science/article/B6V1G-4S6P257-4/2/51809185e817cb6e7b2fe56903f96a2e}, PUBLISHER = {Elsevier B.V.}, ADDRESS = {Amsterdam-Boston-Jena-London-New York-Oxford-Paris-Philadelphia-San Diego-St. Louis}, } @article{Laneve-Tarissan/08, AUTHOR = {Laneve, Cosimo and Tarissan, Fabien}, TITLE = {A simple calculus for proteins and cells}, JOURNAL = {Theor.~Comput.~Sci.}, VOLUME = {404}, NUMBER = {1-2}, PAGES = {127-141}, YEAR = {2008}, EDITOR = {Ausiello, G. and Sannella, D.}, KEYWORDS = {systems biology, process algebra, signal transduction pathways}, URL = {http://www.sciencedirect.com/science/article/B6V1G-4S7J5P1-2/2/a9f2a292cdf29fe047710e3a0c293921}, PUBLISHER = {Elsevier B.V.}, ADDRESS = {Amsterdam-Boston-Jena-London-New York-Oxford-Paris-Philadelphia-San Diego-St. Louis}, } @article{Manca/08, AUTHOR = {Manca, Vincenzo}, TITLE = {The metabolic algorithm for P systems: Principles and applications}, JOURNAL = {Theor.~Comput.~Sci.}, VOLUME = {404}, NUMBER = {1-2}, PAGES = {142-155}, YEAR = {2008}, EDITOR = {Ausiello, G. and Sannella, D.}, KEYWORDS = {metabolism, biological modeling, p systems, mp systems, discrete dynamics}, URL = {http://www.sciencedirect.com/science/article/B6V1G-4S80XN0-3/2/cede3bad07e823e5ca6e6a6a9be89f9b}, PUBLISHER = {Elsevier B.V.}, ADDRESS = {Amsterdam-Boston-Jena-London-New York-Oxford-Paris-Philadelphia-San Diego-St. Louis}, } @article{Romanel-Priami/08, AUTHOR = {Romanel, A. and Priami, C.}, TITLE = {On the decidability and complexity of the structural congruence for beta-binders}, JOURNAL = {Theor.~Comput.~Sci.}, VOLUME = {404}, NUMBER = {1-2}, PAGES = {156-169}, YEAR = {2008}, EDITOR = {Ausiello, G. and Sannella, D.}, KEYWORDS = {process calculi, structural congruence, decidability, complexity}, URL = {http://www.sciencedirect.com/science/article/B6V1G-4S6P257-5/2/e9fd5c5d547ca7ba335e577185c9b0d8}, PUBLISHER = {Elsevier B.V.}, ADDRESS = {Amsterdam-Boston-Jena-London-New York-Oxford-Paris-Philadelphia-San Diego-St. Louis}, } @article{Verlan-Bernardini-Gheorghe-Margenstern/08, AUTHOR = {Verlan, Sergey and Bernardini, Francesco and Gheorghe, Marian and Margenstern, Maurice}, TITLE = {Generalized communicating P systems}, JOURNAL = {Theor.~Comput.~Sci.}, VOLUME = {404}, NUMBER = {1-2}, PAGES = {170-184}, YEAR = {2008}, EDITOR = {Ausiello, G. and Sannella, D.}, KEYWORDS = {p systems, symport, antiport, minimal interactions, formal languages, universal computations}, URL = {http://www.sciencedirect.com/science/article/B6V1G-4S6P257-6/2/9689170f4222b836ea35b135fa00b61a}, PUBLISHER = {Elsevier B.V.}, ADDRESS = {Amsterdam-Boston-Jena-London-New York-Oxford-Paris-Philadelphia-San Diego-St. Louis}, } @article{Hussain-Huth/08, AUTHOR = {Hussain, Altaf and Huth, Michael}, TITLE = {On model checking multiple hybrid views}, JOURNAL = {Theor.~Comput.~Sci.}, VOLUME = {404}, NUMBER = {3}, PAGES = {186-201}, YEAR = {2008}, EDITOR = {Ausiello, G. and Sannella, D.}, KEYWORDS = {hybrid logic, satisfiability, model checking, consistency checking}, URL = {http://www.sciencedirect.com/science/article/B6V1G-4S3WX22-2/2/acaffc956bdffa7d6a40d76a135a4d86}, PUBLISHER = {Elsevier B.V.}, ADDRESS = {Amsterdam-Boston-Jena-London-New York-Oxford-Paris-Philadelphia-San Diego-St. Louis}, } @article{Ben-David-Fisman-Ruah/08, AUTHOR = {Ben-David, Shoham and Fisman, Dana and Ruah, Sitvanit}, TITLE = {Embedding finite automata within regular expressions}, JOURNAL = {Theor.~Comput.~Sci.}, VOLUME = {404}, NUMBER = {3}, PAGES = {202-218}, YEAR = {2008}, EDITOR = {Ausiello, G. and Sannella, D.}, KEYWORDS = {regular expression, finite automata, model checking, linear translation, on-the-fly, embedding, psl}, URL = {http://www.sciencedirect.com/science/article/B6V1G-4S3WX22-1/2/74072dffbff9ab33a2134320503e27d3}, PUBLISHER = {Elsevier B.V.}, ADDRESS = {Amsterdam-Boston-Jena-London-New York-Oxford-Paris-Philadelphia-San Diego-St. Louis}, } @article{Copty-Fine-Ur-Yom-Tov-Ziv/08, AUTHOR = {Copty, Shady and Fine, Shai and Ur, Shmuel and Yom-Tov, Elad and Ziv, Avi}, TITLE = {A probabilistic alternative to regression suites}, JOURNAL = {Theor.~Comput.~Sci.}, VOLUME = {404}, NUMBER = {3}, PAGES = {219-234}, YEAR = {2008}, EDITOR = {Ausiello, G. and Sannella, D.}, KEYWORDS = {regression suites, probabilistic regression suites, coverage analysis, greedy algorithms, future-aware greedy algorithms, hardware verification, software testing}, URL = {http://www.sciencedirect.com/science/article/B6V1G-4S50K97-1/2/ea7d0566d4fc232afe9d31384de64335}, PUBLISHER = {Elsevier B.V.}, ADDRESS = {Amsterdam-Boston-Jena-London-New York-Oxford-Paris-Philadelphia-San Diego-St. Louis}, } @article{Calder-Miller/08, AUTHOR = {Calder, M. and Miller, A.}, TITLE = {An automatic abstraction technique for verifying featured, parameterised systems}, JOURNAL = {Theor.~Comput.~Sci.}, VOLUME = {404}, NUMBER = {3}, PAGES = {235-255}, YEAR = {2008}, EDITOR = {Ausiello, G. and Sannella, D.}, URL = {http://www.sciencedirect.com/science/article/B6V1G-4S7JG2W-1/2/cabda391ffb4f405d165ed66d6a7a29c}, PUBLISHER = {Elsevier B.V.}, ADDRESS = {Amsterdam-Boston-Jena-London-New York-Oxford-Paris-Philadelphia-San Diego-St. Louis}, } @article{Ivancic-Yang-Ganai-Gupta-Ashar/08, AUTHOR = {Ivan{\v{c}}i{\'c}, Franjo and Yang, Zijiang and Ganai, Malay K. and Gupta, Aarti and Ashar, Pranav}, TITLE = {Efficient SAT-based bounded model checking for software verification}, JOURNAL = {Theor.~Comput.~Sci.}, VOLUME = {404}, NUMBER = {3}, PAGES = {256-274}, YEAR = {2008}, EDITOR = {Ausiello, G. and Sannella, D.}, KEYWORDS = {software verification, bounded model checking, sat-based model checking}, URL = {http://www.sciencedirect.com/science/article/B6V1G-4S43BHY-1/2/a01e50ac238ef55616a0c8221b0e3904}, PUBLISHER = {Elsevier B.V.}, ADDRESS = {Amsterdam-Boston-Jena-London-New York-Oxford-Paris-Philadelphia-San Diego-St. Louis}, } @article{Bensalem-Peled-Qu-Tripakis/08, AUTHOR = {Bensalem, Saddek and Peled, Doron and Qu, Hongyang and Tripakis, Stavros}, TITLE = {Automatic generation of path conditions for concurrent timed systems}, JOURNAL = {Theor.~Comput.~Sci.}, VOLUME = {404}, NUMBER = {3}, PAGES = {275-292}, YEAR = {2008}, EDITOR = {Ausiello, G. and Sannella, D.}, KEYWORDS = {path condition, test case generation, timed transition systems, extended timed automata, partial order, difference-bound matrices}, URL = {http://www.sciencedirect.com/science/article/B6V1G-4S3WX22-3/2/b881b88a00237e35f387fa51102c2a9e}, PUBLISHER = {Elsevier B.V.}, ADDRESS = {Amsterdam-Boston-Jena-London-New York-Oxford-Paris-Philadelphia-San Diego-St. Louis}, } @article{Schonherr-Freibothe-Straube-Bormann/08, AUTHOR = {Sch{\"o}nherr, Jens and Freibothe, Martin and Straube, Bernd and Bormann, J{\"o}rg}, TITLE = {Semi-formal verification of the steady state behavior of mixed-signal circuits by SAT-based property checking}, JOURNAL = {Theor.~Comput.~Sci.}, VOLUME = {404}, NUMBER = {3}, PAGES = {293-307}, YEAR = {2008}, EDITOR = {Ausiello, G. and Sannella, D.}, KEYWORDS = {mixed-signal, formal verification, property checking, vhdl behavioral description}, URL = {http://www.sciencedirect.com/science/article/B6V1G-4S6G936-1/2/b744a2023339240ff8264378dfc746ce}, PUBLISHER = {Elsevier B.V.}, ADDRESS = {Amsterdam-Boston-Jena-London-New York-Oxford-Paris-Philadelphia-San Diego-St. Louis}, }