Fakultät für Informatik
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Technische Universität München
Lehrstuhl für Effiziente Algorithmen
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ZTR: A new format for DNA sequence trace data
James K. Bonfield
,
Rodger Staden
Bioinformatics
18
(1), 2002, pp. 3-10
Multiple sequence alignment with arbitrary gap costs: Computing an optimal solution using polyhedral combinatorics
Ernst Althaus
,
Alberto Caprara
,
Hans-Peter Lenhof
,
Knut Reinert
Bioinformatics
18
(S2), 2002, pp. 4-16
Mining viral protease data to extract cleavage knowledge
Ajit Narayanan
,
Xikun Wu
,
Z. Rong Yang
Bioinformatics
18
(S1), 2002, pp. 5-13
A fast top-down method for constructing reliable radiation hybrid frameworks
Trond H. B
,
Inge Jonassen
,
Ingvar Eidhammer
,
Carsten Helgesen
Bioinformatics
18
(1), 2002, pp. 11-18
The metric space of proteins - Comparative study of clustering algorithms
Ori Sasson
,
Nathan Linial
,
Michal Linial
Bioinformatics
18
(S1), 2002, pp. 14-21
Comparative genomics of microbial pathogens and symbionts
Siv G.E. Andersson
,
Cecilia Alsmark
,
Björn Canbäck
,
Wagied Davids
,
Carolin Frank
,
Olof Karlberg
,
Lisa Klasson
,
Boris Antoine-Legault
,
Alex Mira
,
Ivica Tamas
Bioinformatics
18
(S2), 2002, pp. 17-17
Stochastic roadmap simulation for the study of ligand-protein interactions
Mehmet Serkan Apaydin
,
Carlos E. Guestrin
,
Chris Varma
,
Douglas L. Brutlag
,
Jean-Claude Latombe
Bioinformatics
18
(S2), 2002, pp. 18-26
A Bayesian framework for combining gene predictions
Vladimir Pavlović
,
Ashutosh Garg
,
Simon Kasif
Bioinformatics
18
(1), 2002, pp. 19-27
DNA sequence and structure: Direct and indirect recognition in protein-DNA binding
N.R. Steffen
,
S.D. Murphy
,
L. Tolleri
,
G.W. Hatfield
,
R.H. Lathrop
Bioinformatics
18
(S1), 2002, pp. 22-30
Modeling splicing sites with pairwise correlations
Masanori Arita
,
Koji Tsuda
,
Kiyoshi Asai
Bioinformatics
18
(S2), 2002, pp. 27-34
PlantSat: A specialized database for plant satellite repeats
Jiȓí Macas
,
Tibor Mészáros
,
Marcela Nouzová
Bioinformatics
18
(1), 2002, pp. 28-35
Beyond tandem repeats: Complex pattern structures and distant regions of similarity
Amy M. Hauth
,
Deborah A. Joseph
Bioinformatics
18
(S1), 2002, pp. 31-37
Automated annotation of keywords for proteins related to mycoplasmataceae using machine learning techniques
Ana L.C. Bazzan
,
Paulo M. Engel
,
Luciana F. Schroeder
,
Sérgio C. da Silva
Bioinformatics
18
(S2), 2002, pp. 35-43
Calculating the SNP-effective sample size from an alignment
Bernhard Haubold
,
Thomas Wiehe
Bioinformatics
18
(1), 2002, pp. 36-38
Tumor classification by partial least squares using microarray gene expression data
Danh V. Nguyen
,
David M. Rocke
Bioinformatics
18
(1), 2002, pp. 39-50
A new distance measure for comparing sequence profiles based on path lengths along an entropy surface
Gary Benson
Bioinformatics
18
(S2), 2002, pp. 44-53
A sequence-profile-based HMM for predicting and discriminating
\beta
barrel membrane proteins
Pier Luigi Martelli
,
Piero Fariselli
,
Anders Krogh
,
Rita Casadio
Bioinformatics
18
(S1), 2002, pp. 46-53
Linear modes of gene expression determined by independent component analysis
Wolfram Liebermeister
Bioinformatics
18
(1), 2002, pp. 51-60
Common intervals and sorting by reversals: A marriage of necessity
A. Bergeron
,
S. Heber
,
J. Stoye
Bioinformatics
18
(S2), 2002, pp. 54-63
Fully automated ab initio protein structure prediction using I-SITES, HMMSTR and ROSETTA
Christopher Bystroff
,
Yu Shao
Bioinformatics
18
(S1), 2002, pp. 54-61
Extracting transcriptional events from temporal gene expression patterns during Dictyostelium development
R. S̑ás̑ik
,
N. Iranfar
,
T. Hwa
,
W.F. Loomis
Bioinformatics
18
(1), 2002, pp. 61-66
Prediction of contact maps by GIOHMMs and recurrent neural networks using lateral propagation from all four cardinal corners
G. Pollastri
,
P. Baldi
Bioinformatics
18
(S1), 2002, pp. 62-70
Comparative analysis of protein interaction networks
Peer Bork
Bioinformatics
18
(S2), 2002, pp. 64-64
Theoretical analysis of alternative splice forms using computational methods
Stéphanie Boué
,
Martin Vingron
,
Evgenia Kriventseva
,
Ina Koch
Bioinformatics
18
(S2), 2002, pp. 65-73
Discrete simulation of regulatory homo- and heterodimerization in the apoptosis effector phase
Christian Siehs
,
Rainer Oberbauer
,
Gert Mayer
,
Arno Lukas
,
Bernd Mayer
Bioinformatics
18
(1), 2002, pp. 67-76
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