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Technische Universität München
Lehrstuhl für Effiziente Algorithmen
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Quantifying the distribution of probes between subcellular locations using unsupervised pattern unmixing
Luis Pedro Coelho
,
Tao Peng
,
Robert F. Murphy
Bioinformatics
26
(12), 2010, pp. 7-12
Automated tracking and analysis of centrosomes in early Caenorhabditis elegans embryos
Steffen Jaensch
,
Markus Decker
,
Anthony A. Hyman
,
Eugene W. Myers
Bioinformatics
26
(12), 2010, pp. 13-20
A soft kinetic data structure for lesion border detection
Sinan Kockara
,
Mutlu Mete
,
Vincent Yip
,
Brendan Lee
,
Kemal Aydin
Bioinformatics
26
(12), 2010, pp. 21-28
The GNUMAP algorithm: Unbiased probabilistic mapping of oligonucleotides from next-generation sequencing
Nathan L. Clement
,
Quinn Snell
,
Mark J. Clement
,
Peter C. Hollenhorst
,
Jahnvi Purwar
,
Barbara J. Graves
,
Bradley R. Cairns
,
W. Evan Johnson
Bioinformatics
26
(1), 2010, pp. 38-45
Automatic clustering of docking poses in virtual screening process using self-organizing map
Guillaume Bouvier
,
Nathalie Evrard-Todeschi
,
Jean-Pierre Girault
,
Gildas Bertho
Bioinformatics
26
(1), 2010, pp. 53-60
Modeling the interplay of single-stranded binding proteins and nucleic acid secondary structure
Robert A. Forties
,
Ralf Bundschuh
Bioinformatics
26
(1), 2010, pp. 61-67
Using semantic web rules to reason on an ontology of pseudogenes
Matthew E. Holford
,
Ekta Khurana
,
Kei-Hoi Cheung
,
Mark Gerstein
Bioinformatics
26
(12), 2010, pp. 71-78
Computational protein profile similarity screening for quantitative mass spectrometry experiments
Marc Kirchner
,
Bernhard Y. Renard
,
Ullrich Köthe
,
Darryl J. Pappin
,
Fred A. Hamprecht
,
Hanno Steen
,
Judith A.J. Steen
Bioinformatics
26
(1), 2010, pp. 77-83
Methods for combining peptide intensities to estimate relative protein abundance
Brian Carrillo
,
Corey Yanofsky
,
Sylvie Laboissiere
,
Robert Nadon
,
Robert E. Kearney
Bioinformatics
26
(1), 2010, pp. 98-103
MicroRazerS: Rapid alignment of small RNA reads
Anne-Katrin Emde
,
Marcel Grunert
,
David Weese
,
Knut Reinert
,
Silke R. Sperling
Bioinformatics
26
(1), 2010, pp. 123-124
NGSView: An extensible open source editor for next-generation sequencing data
Erik Arner
,
Yoshihide Hayashizaki
,
Carsten O. Daub
Bioinformatics
26
(1), 2010, pp. 125-126
Ancestors 1.0: A web server for ancestral sequence reconstruction
Abdoulaye Banire Diallo
,
Vladimir Makarenkov
,
Mathieu Blanchette
Bioinformatics
26
(1), 2010, pp. 130-131
MATICCE: Mapping transitions in continuous character evolution
Andrew L. Hipp
,
Marcial Escudero
Bioinformatics
26
(1), 2010, pp. 132-133
The gputools package enables GPU computing in R
Joshua Buckner
,
Justin Wilson
,
Mark Seligman
,
Brian Athey
,
Stanley Watson
,
Fan Meng
Bioinformatics
26
(1), 2010, pp. 134-135
MIRAGAA - A methodology for finding coordinated effects of microRNA expression changes and genome aberrations in cancer
Raj K. Gaire
,
James Bailey
,
Jennifer Bearfoot
,
Ian G. Campbell
,
Peter J. Stuckey
,
Izhak Haviv
Bioinformatics
26
(2), 2010, pp. 161-167
Estimating genome-wide IBD sharing from SNP data via an efficient hidden Markov model of LD with application to gene mapping
Sivan Bercovici
,
Christopher Meek
,
Ydo Wexler
,
Dan Geiger
Bioinformatics
26
(12), 2010, pp. 175-182
Target prediction and a statistical sampling algorithm for RNA-RNA interaction
Fenix W.D. Huang
,
Jing Qin
,
Christian M. Reidys
,
Peter F. Stadler
Bioinformatics
26
(2), 2010, pp. 175-181
Optimal algorithms for haplotype assembly from whole-genome sequence data
Dan He
,
Arthur Choi
,
Knot Pipatsrisawat
,
Adnan Darwiche
,
Eleazar Eskin
Bioinformatics
26
(12), 2010, pp. 183-190
Kinase selectivity potential for inhibitors targeting the ATP binding site: A network analysis
Danzhi Huang
,
Ting Zhou
,
Karine Lafleur
,
Cristina Nevado
,
Amedeo Caflisch
Bioinformatics
26
(2), 2010, pp. 198-204
Bayesian variable selection for disease classification using gene expression data
Yang Ai-Jun
,
Song Xin-Yuan
Bioinformatics
26
(2), 2010, pp. 215-222
Modularity and directionality in genetic interaction maps
Ariel Jaimovich
,
Ruty Rinott
,
Maya Schuldiner
,
Hanah Margalit
,
Nir Friedman
Bioinformatics
26
(12), 2010, pp. 228-236
Quantifying uncertainty in genotype calls
Benilton S. Carvalho
,
Thomas A. Louis
,
Rafael A. Irizarry
Bioinformatics
26
(2), 2010, pp. 242-249
SCAN: SNP and copy number annotation
Eric R. Gamazon
,
Wei Zhang
,
Anuar Konkashbaev
,
Shiwei Duan
,
Emily O. Kistner
,
Dan L. Nicolae
,
M. Eileen Dolan
,
Nancy J. Cox
Bioinformatics
26
(2), 2010, pp. 259-262
PyNAST: A flexible tool for aligning sequences to a template alignment
J. Gregory Caporaso
,
Kyle Bittinger
,
Frederic D. Bushman
,
Todd Z. DeSantis
,
Gary L. Andersen
,
Rob Knight
Bioinformatics
26
(2), 2010, pp. 266-267
Markov dynamic models for long-timescale protein motion
Tsung-Han Chiang
,
David Hsu
,
Jean-Claude Latombe
Bioinformatics
26
(12), 2010, pp. 269-277
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