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Technische Universität München
Lehrstuhl für Effiziente Algorithmen
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TFmodeller: Comparative modelling of protein-DNA complexes
Bruno Contreras-Moreira
,
Pierre-Alain Branger
,
Julio Collado-Vides
Bioinformatics
23
(13), 2007, pp. 1694-1696
WilcoxCV: An R package for fast variable selection in cross-validation
Anne-Laure Boulesteix
Bioinformatics
23
(13), 2007, pp. 1702-1704
FASPAD: Fast signaling pathway detection
Falk Hüffner
,
Sebastian Wernicke
,
Thomas Zichner
Bioinformatics
23
(13), 2007, pp. 1708-1709
Fast model-based protein homology detection without alignment
Sepp Hochreiter
,
Martin Heusel
,
Klaus Obermayer
Bioinformatics
23
(14), 2007, pp. 1728-1736
STOP: Searching for transcription factor motifs using gene expression
Libi Hertzberg
,
Shai Izraeli
,
Eytan Domany
Bioinformatics
23
(14), 2007, pp. 1737-1743
Persistent voids: A new structural metric for membrane fusion
Peter M. Kasson
,
Afra Zomorodian
,
Sanghyun Park
,
Nina Singhal
,
Leonidas J. Guibas
,
Vijay S. Pande
Bioinformatics
23
(14), 2007, pp. 1753-1759
Assortative mixing in Protein Contact Networks and protein folding kinetics
Ganesh Bagler
,
Somdatta Sinha
Bioinformatics
23
(14), 2007, pp. 1760-1767
Biological network mapping and source signal deduction
Mark P. Brynildsen
,
Tung-Yun Wu
,
Shi-Shang Jang
,
James C. Liao
Bioinformatics
23
(14), 2007, pp. 1783-1791
CLUMPP: A cluster matching and permutation program for dealing with label switching and multimodality in analysis of population structure
Mattias Jakobsson
,
Noah A. Rosenberg
Bioinformatics
23
(14), 2007, pp. 1801-1806
EuSplice: A unified resource for the analysis of splice signals and alternative splicing in eukaryotic genes
Ashwini Bhasi
,
Ram Vinay Pandey
,
Suriya Prabha Utharasamy
,
Periannan Senapathy
Bioinformatics
23
(14), 2007, pp. 1815-1823
BioMoby web services to support clustering of co-regulated genes based on similarity of promoter configurations
Arnaud Kerhornou
,
Roderic Guigó
Bioinformatics
23
(14), 2007, pp. 1831-1833
Automated Improvement of Domain ANnotations using context analysis of domain arrangements (AIDAN)
Francois Beaussart
,
January Weiner 3rd
,
Erich Bornberg-Bauer
Bioinformatics
23
(14), 2007, pp. 1834-1836
Rapid assessment of correlated amino acids from pair-to-pair (P2P) substitution matrices
Eran Eyal
,
Shmuel Pietrokovski
,
Ivet Bahar
Bioinformatics
23
(14), 2007, pp. 1837-1839
T-Pile - A package for thermodynamic calculations for biomolecules
Dominik Gront
,
Andrzej Kolinski
Bioinformatics
23
(14), 2007, pp. 1840-1842
MODELER4SIMCOAL2: A user-friendly, extensible modeler of demography and linked loci for coalescent simulations
T. Antao
,
A. Beja-Pereira
,
G. Luikart
Bioinformatics
23
(14), 2007, pp. 1848-1850
MutationFinder: A high-performance system for extracting point mutation mentions from text
J. Gregory Caporaso
,
William A., Jr. Baumgartner
,
David A. Randolph
,
K. Bretonnel Cohen
,
Lawrence Hunter
Bioinformatics
23
(14), 2007, pp. 1862-1865
DoriC: A database of oriC regions in bacterial genomes
Feng Gao
,
Chun-Ting Zhang
Bioinformatics
23
(14), 2007, pp. 1866-1867
Isolated ZP-N domains constitute the N-terminal extensions of Zona Pellucida proteins
Isabelle Callebaut
,
Jean-Paul Mornon
,
Philippe Monget
Bioinformatics
23
(15), 2007, pp. 1871-1874
Predicting functionally important residues from sequence conservation
John A. Capra
,
Mona Singh
Bioinformatics
23
(15), 2007, pp. 1875-1882
An evaluation of automated homology modelling methods at low target-template sequence similarity
James A.R. Dalton
,
Richard M. Jackson
Bioinformatics
23
(15), 2007, pp. 1901-1908
Secondary structure based analysis and classification of biological interfaces: Identification of binding motifs in protein-protein interactions
Mainak Guharoy
,
Pinak Chakrabarti
Bioinformatics
23
(15), 2007, pp. 1909-1918
Mining co-regulated gene profiles for the detection of functional associations in gene expression data
Attila Gyenesei
,
Ulrich Wagner
,
Simon Barkow-Oesterreicher
,
Etzard Stolte
,
Ralph Schlapbach
Bioinformatics
23
(15), 2007, pp. 1927-1935
Computational methods for diffusion-influenced biochemical reactions
Maciej Dobrzyński
,
Jordi Vidal Rodríguez
,
Jaap A. Kaandorp
,
Joke G. Blom
Bioinformatics
23
(15), 2007, pp. 1969-1977
Non-parametric quantification of protein lysate arrays
Jianhua Hu
,
Xuming He
,
Keith A. Baggerly
,
Kevin R. Coombes
,
Bryan T.J. Hennessy
,
Gordon B. Mills
Bioinformatics
23
(15), 2007, pp. 1986-1994
Clustering microarray-derived gene lists through implicit literature relationships
Mark F. Burkart
,
Jonathan D. Wren
,
Jason I. Herschkowitz
,
Charles M. Perou
,
Harold R. Garner
Bioinformatics
23
(15), 2007, pp. 1995-2003
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