Fakultät für Informatik
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Technische Universität München
Lehrstuhl für Effiziente Algorithmen
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A tool for gene expression based PubMed search through combining data sources
Maksym Korotkiy
,
Rutger Middelburg
,
Henk Dekker
,
Frank van Harmelen
,
Jan Lankelma
Bioinformatics
20
(12), 2004, pp. 1980-1982
ConSSeq: A web-based application for analysis of amino acid conservation based on HSSP database and within context of structure
R.H. Higa
,
A.J. Montagner
,
R.C. Togawa
,
P.R. Kuser
,
M.E.B. Yamagishi
,
A.L. Mancini
,
G., Jr. Pappas
,
R.T. Miura
,
L.G. Horita
,
G. Neshich
Bioinformatics
20
(12), 2004, pp. 1983-1985
SCANMS: Adjusting for multiple comparisons in sliding window neutrality tests
David H. Ardell
Bioinformatics
20
(12), 2004, pp. 1986-1988
Defining 3D residue environment in protein structures using SCORPION and FORMIGA
R.H. Higa
,
A.G. Oliveira
,
L.G. Horita
,
R.T. Miura
,
M.K. Inoue
,
P.R. Kuser
,
A.L. Mancini
,
M.E B. Yamagishi
,
R.C. Togawa
,
G. Neshich
Bioinformatics
20
(12), 2004, pp. 1989-1991
Defining transcription modules using large-scale gene expression data
Jan Ihmels
,
Sven Bergmann
,
Naama Barkai
Bioinformatics
20
(13), 2004, pp. 1993-2003
Bayesian hierarchical error model for analysis of gene expression data
HyungJun Cho
,
Jae K. Lee
Bioinformatics
20
(13), 2004, pp. 2016-2025
DNA microarray normalization methods can remove bias from differential protein expression analysis of 2D difference gel electrophoresis results
David P. Kreil
,
Natasha A. Karp
,
Kathryn S. Lilley
Bioinformatics
20
(13), 2004, pp. 2026-2034
Phylogenetic trees based on gene content
Daniel H. Huson
,
Mike Steel
Bioinformatics
20
(13), 2004, pp. 2044-2049
Constructing an enzyme-centric view of metabolism
A.B. Horne
,
T.C. Hodgman
,
H.D. Spence
,
A.R. Dalby
Bioinformatics
20
(13), 2004, pp. 2050-2055
Fragment assembly with short reads
Mark Chaisson
,
Pavel Pevzner
,
Haixu Tang
Bioinformatics
20
(13), 2004, pp. 2067-2074
Designing and executing scientific workflows with a programmable integrator
M. Chagoyen
,
M.E. Kurul
,
P.A. De-Alarcón
,
J.M. Carazo
,
A. Gupta
Bioinformatics
20
(13), 2004, pp. 2092-2100
Speeding up whole-genome alignment by indexing frequency vectors
Tamer Kahveci
,
Vebjorn Ljosa
,
Ambuj K. Singh
Bioinformatics
20
(13), 2004, pp. 2122-2134
F2CS: FSSP to CATH and SCOP prediction server
Gad Getz
,
Alina Starovolsky
,
Eytan Domany
Bioinformatics
20
(13), 2004, pp. 2150-2152
Ligand Depot: A data warehouse for ligands bound to macromolecules
Zukang Feng
,
Li Chen
,
Himabindu Maddula
,
Ozgur Akcan
,
Rose Oughtred
,
Helen M. Berman
,
John Westbrook
Bioinformatics
20
(13), 2004, pp. 2153-2155
Protein isoelectric point as a predictor for increased crystallization screening efficiency
Katherine A. Kantardjieff
,
Bernhard Rupp
Bioinformatics
20
(14), 2004, pp. 2162-2168
Comment on ''Protein isoelectric point as a predictor for increased crystallization screening efficiency''
Thomas Huber
,
Bostjan Kobe
Bioinformatics
20
(14), 2004, pp. 2169-2170
Distributions of pI versus pH provide prior information for the design of crystallization screening experiments: Response to comment on ''Protein isoelectric point as a predictor for increased crystallization screening efficiency''
Katherine A. Kantardjieff
,
Mortaza Jamshidian
,
Bernhard Rupp
Bioinformatics
20
(14), 2004, pp. 2171-2174
Probabilistic nucleotide assembling method for sequencing by hybridization
Takaho A. Endo
Bioinformatics
20
(14), 2004, pp. 2181-2188
Design and implementation of a mosquito database through an entomological ontology
Guillaume Koum
,
Augustin Yekel
,
Bengyella Ndifon
,
Frédéric Simard
Bioinformatics
20
(14), 2004, pp. 2205-2211
Alignment of RNA base pairing probability matrices
Ivo L. Hofacker
,
Stephan H.F. Bernhart
,
Peter F. Stadler
Bioinformatics
20
(14), 2004, pp. 2222-2227
Gene co-expression network topology provides a framework for molecular characterization of cellular state
Scott L. Carter
,
Christian M. Brechbühler
,
Michael Griffin
,
Andrew T. Bond
Bioinformatics
20
(14), 2004, pp. 2242-2250
A novel method for estimating ancestral amino acid composition and its application to proteins of the Last Universal Ancestor
D.J. Brooks
,
J.R. Fresco
,
M. Singh
Bioinformatics
20
(14), 2004, pp. 2251-2257
Spot shape modelling and data transformations for microarrays
Claus Thorn Ekstrm
,
Sren Bak
,
Charlotte Kristensen
,
Mats Rudemo
Bioinformatics
20
(14), 2004, pp. 2270-2278
A practical and robust sequence search strategy for structural genomics target selection
James E. Bray
,
Russell L. Marsden
,
Stuart C.G. Rison
,
Alexei Savchenko
,
Aled M. Edwards
,
Janet M. Thornton
,
Christine A. Orengo
Bioinformatics
20
(14), 2004, pp. 2288-2295
Sequence optimization as an alternative to de novo analysis of tandem mass spectrometry data
Alejandro Heredia-Langner
,
William R. Cannon
,
Kenneth D. Jarman
,
Kristin H. Jarman
Bioinformatics
20
(14), 2004, pp. 2296-2304
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