Fakultät für Informatik
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Technische Universität München
Lehrstuhl für Effiziente Algorithmen
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Suche: Journal=Bioinformatics AND YEAR=2007
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Simulating psoriasis by altering transit amplifying cells
Niels Grabe
,
Karsten Neuber
Bioinformatics
23
(11), 2007, pp. 1309-1312
A sequential Monte Carlo EM approach to the transcription factor binding site identification problem
Edmund S. Jackson
,
William J. Fitzgerald
Bioinformatics
23
(11), 2007, pp. 1313-1320
Extending the pathway analysis framework with a test for transcriptional variance implicates novel pathway modulation during myogenic differentiation
Daniel M. Kemp
,
N.R. Nirmala
,
Joseph D. Szustakowski
Bioinformatics
23
(11), 2007, pp. 1356-1362
Simulating Epstein-Barr virus infection with C-ImmSim
Filippo Castiglione
,
Karen Duca
,
Abdul Jarrah
,
Reinhard Laubenbacher
,
Donna Hochberg
,
David Thorley-Lawson
Bioinformatics
23
(11), 2007, pp. 1371-1377
Nested Containment List (NCList): A new algorithm for accelerating interval query of genome alignment and interval databases
Alexander V. Alekseyenko
,
Christopher J. Lee
Bioinformatics
23
(11), 2007, pp. 1386-1393
Data reduction of isotope-resolved LC-MS spectra
Peicheng Du
,
Rajagopalan Sudha
,
Michael B. Prystowsky
,
Ruth Hogue Angeletti
Bioinformatics
23
(11), 2007, pp. 1394-1400
Unsupervised segmentation of continuous genomic data
Nathan Day
,
Andrew Hemmaplardh
,
Robert E. Thurman
,
John A. Stamatoyannopoulos
,
William S. Noble
Bioinformatics
23
(11), 2007, pp. 1424-1426
Ngila: Global pairwise alignments with logarithmic and affine gap costs
Reed A. Cartwright
Bioinformatics
23
(11), 2007, pp. 1427-1428
Human recombination rates are increased around accelerated conserved regions - Evidence for continued selection?
Jan Freudenberg
,
Ying-Hui Fu
,
Louis J. Ptác̑ek
Bioinformatics
23
(12), 2007, pp. 1441-1443
Genomix: A method for combining gene-finders' predictions, which uses evolutionary conservation of sequence and intron-exon structure
Avril Coghlan
,
Richard Durbin
Bioinformatics
23
(12), 2007, pp. 1468-1475
Identifying the biologically relevant gene categories based on gene expression and biological data: An example on prostate cancer
D. Huang
,
Tommy W.S. Chow
Bioinformatics
23
(12), 2007, pp. 1503-1510
An approximation method for solving the steady-state probability distribution of probabilistic Boolean networks
Wai-Ki Ching
,
Shuqin Zhang
,
Michael K. Ng
,
Tatsuya Akutsu
Bioinformatics
23
(12), 2007, pp. 1511-1518
Two-stage designs applying methods differing in costs
Alexandra Goll
,
Peter Bauer
Bioinformatics
23
(12), 2007, pp. 1519-1526
SQUINT: A multiple alignment program and editor
Matthew G. Goode
,
Allen G. Rodrigo
Bioinformatics
23
(12), 2007, pp. 1553-1555
Libaffy: Software for processing Affymetrix(R) GeneChip(R) data
Steven A. Eschrich
,
Andrew M. Hoerter
Bioinformatics
23
(12), 2007, pp. 1562-1564
ProServer: A simple, extensible Perl DAS server
Robert D. Finn
,
James W. Stalker
,
David K. Jackson
,
Eugene Kulesha
,
Jody Clements
,
Roger Pettett
Bioinformatics
23
(12), 2007, pp. 1568-1570
iHMMune-align: Hidden Markov model-based alignment and identification of germline genes in rearranged immunoglobulin gene sequences
Bruno A. Gaëta
,
Harald R. Malming
,
Katherine J.L. Jackson
,
Michael E. Bain
,
Patrick Wilson
,
Andrew M. Collins
Bioinformatics
23
(13), 2007, pp. 1580-1587
Meta-analysis of gene expression data: A predictor-based approach
Irit Fishel
,
Alon Kaufman
,
Eytan Ruppin
Bioinformatics
23
(13), 2007, pp. 1599-1606
A network-based method for target selection in metabolic networks
R. Guimerà
,
M. Sales-Pardo
,
L.A.N. Amaral
Bioinformatics
23
(13), 2007, pp. 1616-1622
Time-varying modeling of gene expression regulatory networks using the wavelet dynamic vector autoregressive method
A. Fujita
,
J.R. Sato
,
H.M. Garay-Malpartida
,
P.A. Morettin
,
M.C. Sogayar
,
C.E. Ferreira
Bioinformatics
23
(13), 2007, pp. 1623-1630
Phenotypic clustering of yeast mutants based on kinetochore microtubule dynamics
K. Jaqaman
,
J.F. Dorn
,
E. Marco
,
P.K. Sorger
,
G. Danuser
Bioinformatics
23
(13), 2007, pp. 1666-1673
The qualitative and time-dependent character of spatial relations in biomedical ontologies
Thomas Bittner
,
Louis J. Goldberg
Bioinformatics
23
(13), 2007, pp. 1674-1682
CTX-BLAST: Context sensitive version of protein BLAST
Anna Gambin
,
Piotr Wojtalewicz
Bioinformatics
23
(13), 2007, pp. 1686-1688
AutoCSA, an algorithm for high throughput DNA sequence variant detection in cancer genomes
E. Dicks
,
J.W. Teague
,
P. Stephens
,
K. Raine
,
A. Yates
,
C. Mattocks
,
P. Tarpey
,
A. Butler
,
A. Menzies
,
D. Richardson
,
A. Jenkinson
,
H. Davies
,
S. Edkins
,
S. Forbes
,
K. Gray
,
C. Greenman
,
R. Shepherd
,
M.R. Stratton
,
P.A. Futreal
,
R. Wooster
Bioinformatics
23
(13), 2007, pp. 1689-1691
SNP detection exploiting multiple sources of redundancy in large EST collections improves validation rates
Ben J. Hayes
,
Kjetil Nilsen
,
Paul R. Berg
,
Eli Grindflek
,
Sigbjrn Lien
Bioinformatics
23
(13), 2007, pp. 1692-1693
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