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Technische Universität München
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Going from where to why - Interpretable prediction of protein subcellular localization
Sebastian Briesemeister
,
Jörg Rahnenführer
,
Oliver Kohlbacher
Bioinformatics
26
(9), 2010, pp. 1232-1238
PanCGHweb: A web tool for genotype calling in pangenome CGH data
Jumamurat R. Bayjanov
,
Roland J. Siezen
,
Sacha A.F.T. van Hijum
Bioinformatics
26
(9), 2010, pp. 1256-1257
WellReader: A MATLAB program for the analysis of fluorescence and luminescence reporter gene data
Frédéric Boyer
,
Bruno Besson
,
Guillaume Baptist
,
Jérôme Izard
,
Corinne Pinel
,
Delphine Ropers
,
Johannes Geiselmann
,
Hidde de Jong
Bioinformatics
26
(9), 2010, pp. 1262-1263
HALO - A Java framework for precise transcript half-life determination
Caroline C. Friedel
,
Stefanie Kaufmann
,
Lars Dölken
,
Ralf Zimmer
Bioinformatics
26
(9), 2010, pp. 1264-1266
TopoGSA: Network topological gene set analysis
Enrico Glaab
,
Anaïs Baudot
,
Natalio Krasnogor
,
Alfonso Valencia
Bioinformatics
26
(9), 2010, pp. 1271-1272
Detection and characterization of novel sequence insertions using paired-end next-generation sequencing
Iman Hajirasouliha
,
Fereydoun Hormozdiari
,
Can Alkan
,
Jeffrey M. Kidd
,
Inanc Birol
,
Evan E. Eichler
,
S. Cenk Sahinalp
Bioinformatics
26
(10), 2010, pp. 1277-1283
Quality assessment of protein model-structures using evolutionary conservation
Matan Kalman
,
Nir Ben-Tal
Bioinformatics
26
(10), 2010, pp. 1299-1307
Streamlining the construction of large-scale dynamic models using generic kinetic equations
Delali A. Adiamah
,
Julia Handl
,
Jean-Marc Schwartz
Bioinformatics
26
(10), 2010, pp. 1324-1331
An integer programming formulation to identify the sparse network architecture governing differentiation of embryonic stem cells
Ipsita Banerjee
,
Spandan Maiti
,
Natesh Parashurama
,
Martin Yarmush
Bioinformatics
26
(10), 2010, pp. 1332-1339
Permutation importance: A corrected feature importance measure
André Altmann
,
Laura Toloşi
,
Oliver Sander
,
Thomas Lengauer
Bioinformatics
26
(10), 2010, pp. 1340-1347
ACCUSA - Accurate SNP calling on draft genomes
Sebastian Fröhler
,
Christoph Dieterich
Bioinformatics
26
(10), 2010, pp. 1364-1365
DensiTree: Making sense of sets of phylogenetic trees
Remco R. Bouckaert
Bioinformatics
26
(10), 2010, pp. 1372-1373
Modular analysis of gene expression data with R
Gábor Csárdi
,
Zoltán Kutalik
,
Sven Bergmann
Bioinformatics
26
(10), 2010, pp. 1376-1377
SICAGO: Semi-supervised cluster analysis using semantic distance between gene pairs in Gene Ontology
Bo-Yeong Kang
,
Song Ko
,
Dae-Won Kim
Bioinformatics
26
(10), 2010, pp. 1384-1385
An extended IUPAC nomenclature code for polymorphic nucleic acids
Andrew D. Johnson
Bioinformatics
26
(10), 2010, pp. 1386-1389
Small RNAs in angiosperms: Sequence characteristics, distribution and generation
Dijun Chen
,
Yijun Meng
,
Xiaoxia Ma
,
Chuanzao Mao
,
Youhuang Bai
,
Junjie Cao
,
Haibin Gu
,
Ping Wu
,
Ming Chen
Bioinformatics
26
(11), 2010, pp. 1391-1394
CNAnova: A new approach for finding recurrent copy number abnormalities in cancer SNP microarray data
Sergii Ivakhno
,
Simon Tavaré
Bioinformatics
26
(11), 2010, pp. 1395-1402
HIV classification using the coalescent theory
Ingo Bulla
,
Anne-Kathrin Schultz
,
Fabian Schreiber
,
Ming Zhang
,
Thomas Leitner
,
Bette Korber
,
Burkhard Morgenstern
,
Mario Stanke
Bioinformatics
26
(11), 2010, pp. 1409-1415
Multilevel support vector regression analysis to identify condition-specific regulatory networks
Li Chen
,
Jianhua Xuan
,
Rebecca B. Riggins
,
Yue Wang
,
Eric P. Hoffman
,
Robert Clarke
Bioinformatics
26
(11), 2010, pp. 1416-1422
Identifying duplicate content using statistically improbable phrases
Mounir Errami
,
Zhaohui Sun
,
Angela C. George
,
Tara C. Long
,
Michael A. Skinner
,
Jonathan D. Wren
,
Harold R. Garner
Bioinformatics
26
(11), 2010, pp. 1453-1457
The Genomedata format for storing large-scale functional genomics data
Michael M. Hoffman
,
Orion J. Buske
,
William Stafford Noble
Bioinformatics
26
(11), 2010, pp. 1458-1459
Picante: R tools for integrating phylogenies and ecology
Steven W. Kembel
,
Peter D. Cowan
,
Matthew R. Helmus
,
William K. Cornwell
,
Helene Morlon
,
David D. Ackerly
,
Simon P. Blomberg
,
Campbell O. Webb
Bioinformatics
26
(11), 2010, pp. 1463-1464
Characterization of the N-ATPase, a distinct, laterally transferred Na
^+
-translocating form of the bacterial F-type membrane ATPase
Daria V. Dibrova
,
Michael Y. Galperin
,
Armen Y. Mulkidjanian
Bioinformatics
26
(12), 2010, pp. 1473-1476
Ligand-binding site prediction of proteins based on known fragment-fragment interactions
Kota Kasahara
,
Kengo Kinoshita
,
Toshihisa Takagi
Bioinformatics
26
(12), 2010, pp. 1493-1499
Supersplat - Spliced RNA-seq alignment
Douglas W., Jr. Bryant
,
Rongkun Shen
,
Henry D. Priest
,
Weng-Keen Wong
,
Todd C. Mockler
Bioinformatics
26
(12), 2010, pp. 1500-1505
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