Fakultät für Informatik
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Technische Universität München
Lehrstuhl für Effiziente Algorithmen
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BioWeka - Extending the Weka framework for bioinformatics
Jan E. Gewehr
,
Martin Szugat
,
Ralf Zimmer
Bioinformatics
23
(5), 2007, pp. 651-653
The ESID Online Database network
D. Guzman
,
D. Veit
,
V. Knerr
,
G. Kindle
,
B. Gathmann
,
A.M. Eades-Perner
,
B. Grimbacher
Bioinformatics
23
(5), 2007, pp. 654-655
Deleterious SNP prediction: Be mindful of your training data!
Matthew A. Care
,
Chris J. Needham
,
Andrew J. Bulpitt
,
David R. Westhead
Bioinformatics
23
(6), 2007, pp. 664-672
Identifying bacterial genes and endosymbiont DNA with Glimmer
Arthur L. Delcher
,
Kirsten A. Bratke
,
Edwin C. Powers
,
Steven L. Salzberg
Bioinformatics
23
(6), 2007, pp. 673-679
A 3D pattern matching algorithm for DNA sequences
Joan Hérisson
,
Guillaume Payen
,
Rachid Gherbi
Bioinformatics
23
(6), 2007, pp. 680-686
Quaternionic periodicity transform: An algebraic solution to the tandem repeat detection problem
Andrzej K. Brodzik
Bioinformatics
23
(6), 2007, pp. 694-700
Hardware acceleration of processing of mass spectrometric data for proteomics
Istvan Bogdan
,
Daniel Coca
,
Jenny Rivers
,
Robert J. Beynon
Bioinformatics
23
(6), 2007, pp. 724-731
An ensemble approach to microarray data-based gene prioritization after missing value imputation
Dong Hua
,
Yinglei Lai
Bioinformatics
23
(6), 2007, pp. 747-754
TreeQ-VISTA: An interactive tree visualization tool with functional annotation query capabilities
Shengyin Gu
,
Iain Anderson
,
Victor Kunin
,
Michael Cipriano
,
Simon Minovitsky
,
Gunther Weber
,
Nina Amenta
,
Bernd Hamann
,
Inna Dubchak
Bioinformatics
23
(6), 2007, pp. 764-766
Biskit - A software platform for structural bioinformatics
Raik Grünberg
,
Michael Nilges
,
Johan Leckner
Bioinformatics
23
(6), 2007, pp. 769-770
CoCo: A web application to display, store and curate ChIP-on-chip data integrated with diverse types of gene expression data
Charles Girardot
,
Oleg Sklyar
,
Sophie Grosz
,
Wolfgang Huber
,
Eileen E.M. Furlong
Bioinformatics
23
(6), 2007, pp. 771-773
AphidBase: A database for aphid genomic resources
Jean-Pierre Gauthier
,
Fabrice Legeai
,
Alain Zasadzinski
,
Claude Rispe
,
Denis Tagu
Bioinformatics
23
(6), 2007, pp. 783-784
Large scale genotype-phenotype correlation analysis based on phylogenetic trees
Farhat Habib
,
Andrew D. Johnson
,
Ralf Bundschuh
,
Daniel Janies
Bioinformatics
23
(7), 2007, pp. 785-788
PhyloGena - A user-friendly system for automated phylogenetic annotation of unknown sequences
Kristian Hanekamp
,
Uta Bohnebeck
,
Bánk Beszteri
,
Klaus Valentin
Bioinformatics
23
(7), 2007, pp. 793-801
SCOOP: A simple method for identification of novel protein superfamily relationships
Alex Bateman
,
Robert D. Finn
Bioinformatics
23
(7), 2007, pp. 809-814
Assessment of phylogenomic and orthology approaches for phylogenetic inference
B.E. Dutilh
,
V. van Noort
,
R.T.J.M. van der Heijden
,
T. Boekhout
,
B. Snel
,
M.A. Huynen
Bioinformatics
23
(7), 2007, pp. 815-824
A simulation test bed for hypotheses of genome evolution
Robert G. Beiko
,
Robert L. Charlebois
Bioinformatics
23
(7), 2007, pp. 825-831
A new versatile database created for geneticists and breeders to link molecular and phenotypic data in perennial crops: The AppleBreed DataBase
A. Antofie
,
M. Lateur
,
R. Oger
,
A. Patocchi
,
C.E. Durel
,
W.E. Van de Weg
Bioinformatics
23
(7), 2007, pp. 882-891
NetPhosYeast: Prediction of protein phosphorylation sites in yeast
Christian R. Ingrell
,
Martin L. Miller
,
Ole N. Jensen
,
Nikolaj Blom
Bioinformatics
23
(7), 2007, pp. 895-897
DFprot: A webtool for predicting local chain deformability
José Ignacio Garzón
,
Julio Kovacs
,
Ruben Abagyan
,
Pablo Chacón
Bioinformatics
23
(7), 2007, pp. 901-902
Automatic correspondence of tags and genes (ACTG): A tool for the analysis of SAGE, MPSS and SBS data
Pedro A.F. Galante
,
Jeff Trimarchi
,
Constance L. Cepko
,
Sandro J. de Souza
,
Lucila Ohno-Machado
,
Winston P. Kuo
Bioinformatics
23
(7), 2007, pp. 903-905
NetMatch: A Cytoscape plugin for searching biological networks
A. Ferro
,
R. Giugno
,
G. Pigola
,
A. Pulvirenti
,
D. Skripin
,
G.D. Bader
,
D. Shasha
Bioinformatics
23
(7), 2007, pp. 910-912
Ontology development for biological systems: Immunology
Alexander D. Diehl
,
Jamie A. Lee
,
Richard H. Scheuermann
,
Judith A. Blake
Bioinformatics
23
(7), 2007, pp. 913-915
HomologMiner: Looking for homologous genomic groups in whole genomes
Minmei Hou
,
Piotr Berman
,
Chih-Hao Hsu
,
Robert S. Harris
Bioinformatics
23
(8), 2007, pp. 917-925
Local structural disorder imparts plasticity on linear motifs
Monika Fuxreiter
,
Peter Tompa
,
István Simon
Bioinformatics
23
(8), 2007, pp. 950-956
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