Fakultät für Informatik
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Technische Universität München
Lehrstuhl für Effiziente Algorithmen
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Utility library for structural bioinformatics
Dominik Gront
,
Andrzej Kolinski
Bioinformatics
24
(4), 2008, pp. 584-585
KEGGanim: Pathway animations for high-throughput data
Priit Adler
,
Jüri Reimand
,
Jürgen Jänes
,
Raivo Kolde
,
Hedi Peterson
,
Jaak Vilo
Bioinformatics
24
(4), 2008, pp. 588-590
DECOMP - From interpreting Mass Spectrometry peaks to solving the Money Changing Problem
Sebastian Böcker
,
Zsuzsanna Lipták
,
Marcel Martin
,
Anton Pervukhin
,
Henner Sudek
Bioinformatics
24
(4), 2008, pp. 591-593
NetworkBLAST: Comparative analysis of protein networks
Maxim Kalaev
,
Mike Smoot
,
Trey Ideker
,
Roded Sharan
Bioinformatics
24
(4), 2008, pp. 594-596
Prediction of protein functional residues from sequence by probability density estimation
J.D. Fischer
,
C.E. Mayer
,
J. Söding
Bioinformatics
24
(5), 2008, pp. 613-620
Structural search and retrieval using a tableau representation of protein folding patterns
Arun S. Konagurthu
,
Peter J. Stuckey
,
Arthur M. Lesk
Bioinformatics
24
(5), 2008, pp. 645-651
DiMoVo: A Voronoi tessellation-based method for discriminating crystallographic and biological protein-protein interactions
Julie Bernauer
,
Ranjit Prasad Bahadur
,
Francis Rodier
,
Joël Janin
,
Anne Poupon
Bioinformatics
24
(5), 2008, pp. 652-658
Observation of multiple folding pathways of
\beta
-hairpin trpzip2 from independent continuous folding trajectories
Changjun Chen
,
Yi Xiao
Bioinformatics
24
(5), 2008, pp. 659-665
Genome-wide co-expression based prediction of differential expressions
Yinglei Lai
Bioinformatics
24
(5), 2008, pp. 666-673
Incorporating sequence information into the scoring function: A hidden Markov model for improved peptide identification
Jainab Khatun
,
Eric Hamlett
,
Morgan C. Giddings
Bioinformatics
24
(5), 2008, pp. 674-681
Using repeated measurements to validate hierarchical gene clusters
Laurent Bréhélin
,
Olivier Gascuel
,
Olivier Martin
Bioinformatics
24
(5), 2008, pp. 682-688
A feed-forward loop guarantees robust behavior in Escherichia coli carbohydrate uptake
A. Kremling
,
K. Bettenbrock
,
E.D. Gilles
Bioinformatics
24
(5), 2008, pp. 704-710
GENESIS: Genome evolution scenarios
Simon Gog
,
Martin Bader
,
Enno Ohlebusch
Bioinformatics
24
(5), 2008, pp. 711-712
Jenti: An efficient tool for mining complex inbred genealogies
Mario Falchi
,
Christian Fuchsberger
Bioinformatics
24
(5), 2008, pp. 724-726
KUTE-BASE: Storing, downloading and exporting MIAME-compliant microarray experiments in minutes rather than hours
Sorin Draghici
,
Adi L. Tarca
,
Longfei Yu
,
Stephen Ethier
,
Roberto Romero
Bioinformatics
24
(5), 2008, pp. 738-740
Biological pathway kinetic rate constants are scale-invariant
Scott Grandison
,
Richard J. Morris
Bioinformatics
24
(6), 2008, pp. 741-743
A machine-learning approach to combined evidence validation of genome assemblies
Jeong-Hyeon Choi
,
Sun Kim
,
Haixu Tang
,
Justen Andrews
,
Don G. Gilbert
,
John K. Colbourne
Bioinformatics
24
(6), 2008, pp. 744-750
A segmental maximum a posteriori approach to genome-wide copy number profiling
Robin Andersson
,
Carl E.G. Bruder
,
Arkadiusz Piotrowski
,
Uwe Menzel
,
Helena Nord
,
Johanna Sandgren
,
Torgeir R. Hvidsten
,
Teresita Diaz de Ståhl
,
Jan P. Dumanski
,
Jan Komorowski
Bioinformatics
24
(6), 2008, pp. 751-758
Estimation and assessment of raw copy numbers at the single locus level
H. Bengtsson
,
R. Irizarry
,
B. Carvalho
,
T.P. Speed
Bioinformatics
24
(6), 2008, pp. 759-767
Compressed indexing and local alignment of DNA
T.W. Lam
,
W.K. Sung
,
S.L. Tam
,
C.K. Wong
,
S.M. Yiu
Bioinformatics
24
(6), 2008, pp. 791-797
De novo identification of highly diverged protein repeats by probabilistic consistency
A. Biegert
,
J. Söding
Bioinformatics
24
(6), 2008, pp. 807-814
Inferring horizontal transfers in the presence of rearrangements by the minimum evolution criterion
Hadas Birin
,
Zohar Gal-Or
,
Isaac Elias
,
Tamir Tuller
Bioinformatics
24
(6), 2008, pp. 826-832
Effect of spatial distribution of T-Cells and HIV load on HIV progression
Frank M. Graziano
,
Samira Y. Kettoola
,
Judy M. Munshower
,
Jack T. Stapleton
,
George J. Towfic
Bioinformatics
24
(6), 2008, pp. 855-860
GenomeVx: Simple web-based creation of editable circular chromosome maps
Gavin C. Conant
,
Kenneth H. Wolfe
Bioinformatics
24
(6), 2008, pp. 861-862
Interactive visualization software for exploring phylogenetic trees and clades
Mark Derthick
Bioinformatics
24
(6), 2008, pp. 868-869
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