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Identifying DNA and protein patterns with statistically significant alignments of multiple sequences
G.Z. Hertz
,
G.D. Stormo
Bioinformatics
15
(7), 1999, pp. 563-577
Analysis of base-pairing potentials between 16S rRNA and 5' UTR for translation initiation in various prokaryotes
Y. Osada
,
R. Saito
,
M. Tomita
Bioinformatics
15
(7), 1999, pp. 578-581
Nucleosomal DNA property database
V.G. Levitsky
,
M.P. Ponomarenko
,
J.V. Ponomarenko
,
A.S. Frolov
,
N.A. Kolchanov
Bioinformatics
15
(7), 1999, pp. 582-592
Genetic control of flower morphogenesis in Arabidopsis thaliana: A logical analysis
L. Mendoza
,
D. Thieffry
,
E.R. Alvarez-Buylla
Bioinformatics
15
(7), 1999, pp. 593-606
SCPD: A promoter database of the yeast Saccharomyces cerevisiae
J. Zhu
,
M.Q. Zhang
Bioinformatics
15
(7), 1999, pp. 607-611
GeneBuilder: Interactive in silico prediction of gene structure
L. Milanesi
,
D. D'Angelo
,
I.B. Rogozin
Bioinformatics
15
(7), 1999, pp. 612-621
Estimating transcription factor bindability on DNA
T. Tsunoda
,
T. Takagi
Bioinformatics
15
(7), 1999, pp. 622-630
Oligonucleotide frequency matrices addressed to recognizing functional DNA sites
M.P. Ponomarenko
,
J.V. Ponomarenko
,
A.S. Frolov
,
O.A. Podkolodnaya
,
D.G. Vorobyev
,
N.A. Kolchanov
,
G.C. Overton
Bioinformatics
15
(7), 1999, pp. 631-643
Investigating extended regulatory regions of genomic DNA sequences
V.N. Babenko
,
P.S. Kosarev
,
O.V. Vishnevsky
,
V.G. Levitsky
,
VV. Basin
,
A.S. Frolov
Bioinformatics
15
(7), 1999, pp. 644-653
Conformational and physicochemical DNA features specific for transcription factor binding sites
J.V. Ponomarenko
,
M.P. Ponomarenko
,
A.S. Frolov
,
D.G. Vorobyev
,
G.C. Overton
,
N.A. Kolchanov
Bioinformatics
15
(7), 1999, pp. 654-668
Integrated databases and computer systems for studying eukaryotic gene expression
N.A. Kolchanov
,
M.P. Ponomarenko
,
A.S. Frolov
,
E.A. Ananko
,
F.A. Kolpakov
,
E.V. Ignatieva
,
O.A. Podkolodnaya
,
T.N. Goryachkovskaya
,
I.L. Stepanenko
,
T.I. Merkulova
,
V.V. Babenko
,
Y.V. Ponomarenko
,
A.V. Kochetov
,
N.L. Podkolodny
,
D.V. Vorobiev
,
S.V. Lavryushev
,
D.A. Grigorovich
,
Y.V. Kondrakhin
,
L. Milanesi
,
E. Wingender
,
V. Solovyev
,
G.C. Overton
Bioinformatics
15
(7), 1999, pp. 669-686
Identification of sequence-dependent DNA features correlating to activity of DNA sites interacting with proteins
M.P. Ponomarenko
,
J.V. Ponomarenko
,
A.S. Frolov
,
N.L. Podkolodny
,
L.K. Savinkova
,
N.A. Kolchanov
,
G.C. Overton
Bioinformatics
15
(7), 1999, pp. 687-703
Prediction of eukaryotic mRNA translational properties
A.V. Kochetov
,
M.P. Ponomarenko
,
A.S. Frolov
,
L.L. Kisselev
,
N.A. Kolchanov
Bioinformatics
15
(7), 1999, pp. 704-712
Interactive data input into the GeneNet database
F.A. Kolpakov
,
E.A. Ananko
Bioinformatics
15
(7), 1999, pp. 713-714
Financing a future for public biological data
L.B. Ellis
,
D. Kalumbi
Bioinformatics
15
(9), 1999, pp. 717-722
Neural network input representations that produce accurate consensus sequences from DNA fragment assemblies
C.F. Allex
,
J.W. Shavlik
,
F.R. Blattner
Bioinformatics
15
(9), 1999, pp. 723-728
Shotgun: Getting more from sequence similarity searches
S.C. Pegg
,
P.C. Babbitt
Bioinformatics
15
(9), 1999, pp. 729-740
Associative database of protein sequences
J. Hanke
,
G. Lehmann
,
P. Bork
,
J.G. Reich
Bioinformatics
15
(9), 1999, pp. 741-748
Mathematical simulation and analysis of cellular metabolism and regulation
I. Goryanin
,
T.C. Hodgman
,
E. Selkov
Bioinformatics
15
(9), 1999, pp. 749-758
Finding families for genomic ORFans
D. Fischer
,
D. Eisenberg
Bioinformatics
15
(9), 1999, pp. 759-762
K-Estimator: Calculation of the number of nucleotide substitutions per site and the confidence intervals
J.M. Comeron
Bioinformatics
15
(9), 1999, pp. 763-764
TargetDB: A database of peptides targeting proteins to subcellular locations
T. Wei
,
M. O'Connell
Bioinformatics
15
(9), 1999, pp. 765-766
SWEET - WWW-based rapid 3D construction of oligo- and polysaccharides
A. Bohne
,
E. Lang
,
C.W. von der Lieth
Bioinformatics
15
(9), 1999, pp. 767-768
MatrixPlot: Visualizing sequence constraints
J. Gorodkin
,
H.H. Staerfeldt
,
O. Lund
,
S. Brunak
Bioinformatics
15
(9), 1999, pp. 769-770
Swissknife - ''lazy parsing'' of SWISS-PROT entries
H. Hermjakob
,
W. Fleischmann
,
R. Apweiler
Bioinformatics
15
(9), 1999, pp. 771-772
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