Fakultät für Informatik
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Technische Universität München
Lehrstuhl für Effiziente Algorithmen
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Poxvirus Orthologous Clusters (POCs)
Angelika Ehlers
,
John Osborne
,
Stephanie Slack
,
Rachel L. Roper
,
Chris Upton
Bioinformatics
18
(11), 2002, pp. 1544-1545
QuickTree: Building huge Neighbour-Joining trees of protein sequences
Kevin Howe
,
Alex Bateman
,
Richard Durbin
Bioinformatics
18
(11), 2002, pp. 1546-1547
Ramachandran plot on the web
S.S. Sheik
,
P. Sundararajan
,
A.S.Z. Hussain
,
K. Sekar
Bioinformatics
18
(11), 2002, pp. 1548-1549
Accomplishments and challenges in literature data mining for biology
Lynette Hirschman
,
Jong C. Park
,
Junichi Tsujii
,
Limsoon Wong
,
Cathy H. Wu
Bioinformatics
18
(12), 2002, pp. 1553-1561
The presence of signal peptide significantly affects transmembrane topology prediction
Demelo M. Lao
,
Masafumi Arai
,
Masami Ikeda
,
Toshio Shimizu
Bioinformatics
18
(12), 2002, pp. 1562-1566
Computational antisense oligo prediction with a neural network model
Alistair M. Chalk
,
Erik L.L. Sonnhammer
Bioinformatics
18
(12), 2002, pp. 1567-1575
Comparing expression profiles of genes with similar promoter regions
Peter J. Park
,
Atul J. Butte
,
Isaac S. Kohane
Bioinformatics
18
(12), 2002, pp. 1576-1584
Robust estimators for expression analysis
Earl Hubbell
,
Wei-Min Liu
,
Rui Mei
Bioinformatics
18
(12), 2002, pp. 1585-1592
Analysis of high density expression microarrays with signed-rank call algorithms
W.-m. Liu
,
R. Mei
,
X. Di
,
T.B. Ryder
,
E. Hubbell
,
S. Dee
,
T.A. Webster
,
C.A. Harrington
,
M.-h. Ho
,
J. Baid
,
S.P. Smeekens
Bioinformatics
18
(12), 2002, pp. 1593-1599
Between-group analysis of microarray data
Aedín C. Culhane
,
Guy Perrière
,
Elizabeth C. Considine
,
Thomas G. Cotter
,
Desmond G. Higgins
Bioinformatics
18
(12), 2002, pp. 1600-1608
Calculation of the minimum number of replicate spots required for detection of significant gene expression fold change in microarray experiments
Michael A. Black
,
R.W. Doerge
Bioinformatics
18
(12), 2002, pp. 1609-1616
A decomposition model to track gene expression signatures: Preview on observer-independent classification of ovarian cancer
Ann-Marie Martoglio
,
James W. Miskin
,
Stephen K. Smith
,
David J.C. MacKay
Bioinformatics
18
(12), 2002, pp. 1617-1624
Partial least squares proportional hazard regression for application to DNA microarray survival data
Danh V. Nguyen
,
David M. Rocke
Bioinformatics
18
(12), 2002, pp. 1625-1632
Statistical analysis of high-density oligonucleotide arrays: A multiplicative noise model
R. S̑ás̑ik
,
E. Calvo
,
J. Corbeil
Bioinformatics
18
(12), 2002, pp. 1633-1640
Modeling the percolation of annotation errors in a database of protein sequences
Walter R. Gilks
,
Benjamin Audit
,
Daniela de Angelis
,
Sophia Tsoka
,
Christos A. Ouzounis
Bioinformatics
18
(12), 2002, pp. 1641-1649
PFDB: A generic protein family database integrating the CATH domain structure database with sequence based protein family resources
Adrian J. Shepherd
,
Nigel J. Martin
,
Roger G. Johnson
,
Paul Kellam
,
Christine A. Orengo
Bioinformatics
18
(12), 2002, pp. 1666-1672
A hierarchical approach to aligning collinear regions of genomes
Mikhail A. Roytberg
,
Aleksey Y. Ogurtsov
,
Svetlana A. Shabalina
,
Alexey S. Kondrashov
Bioinformatics
18
(12), 2002, pp. 1673-1680
SNPper: Retrieval and analysis of human SNPs
A. Riva
,
I.S. Kohane
Bioinformatics
18
(12), 2002, pp. 1681-1685
Oligodb - Interactive design of oligo DNA for transcription profiling of human genes
Ralf Mrowka
,
Johannes Schuchhardt
,
Christoph Gille
Bioinformatics
18
(12), 2002, pp. 1686-1687
PCR designer for restriction analysis of various types of sequence mutation
Xiayi Ke
,
Andrew Collins
,
Shu Ye
Bioinformatics
18
(12), 2002, pp. 1688-1689
Design of endonuclease restriction sites into primers for PCR cloning
Jianghui Hou
Bioinformatics
18
(12), 2002, pp. 1690-1691
RED: The analysis, management and dissemination of expressed sequence tags
R. Everitt
,
S.E. Minnema
,
M.A. Wride
,
C.S. Koster
,
J.E. Hance
,
F.C. Mansergh
,
D.E. Rancourt
Bioinformatics
18
(12), 2002, pp. 1692-1693
DNACompress: Fast and effective DNA sequence compression
Xin Chen
,
Ming Li
,
Bin Ma
,
John Tromp
Bioinformatics
18
(12), 2002, pp. 1696-1698
PoPMuSIC, rationally designing point mutations in protein structures
J.M. Kwasigroch
,
D. Gilis
,
Y. Dehouck
,
M. Rooman
Bioinformatics
18
(12), 2002, pp. 1701-1702
OWEN: Aligning long collinear regions of genomes
Aleksey Y. Ogurtsov
,
Mikhail A. Roytberg
,
Svetlana A. Shabalina
,
Alexey S. Kondrashov
Bioinformatics
18
(12), 2002, pp. 1703-1704
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