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Technische Universität München
Lehrstuhl für Effiziente Algorithmen
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Suche: Journal=Bioinformatics AND Volume=25
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Reconstructing spatiotemporal gene expression data from partial observations
Dustin A. Cartwright
,
Siobhan M. Brady
,
David A. Orlando
,
Bernd Sturmfels
,
Philip N. Benfey
Bioinformatics
25
(19), 2009, pp. 2581-2587
DiProGB: The dinucleotide properties genome browser
Maik Friedel
,
Swetlana Nikolajewa
,
Jürgen Sühnel
,
Thomas Wilhelm
Bioinformatics
25
(19), 2009, pp. 2603-2604
Probabilistic resolution of multi-mapping reads in massively parallel sequencing data using MuMRescueLite
Takehiro Hashimoto
,
Michiel J.L. de Hoon
,
Sean M. Grimmond
,
Carsten O. Daub
,
Yoshihide Hayashizaki
,
Geoffrey J. Faulkner
Bioinformatics
25
(19), 2009, pp. 2613-2614
RNA-MATE: A recursive mapping strategy for high-throughput RNA-sequencing data
Nicole Cloonan
,
Qinying Xu
,
Geoffrey J. Faulkner
,
Darrin F. Taylor
,
Dave T.P. Tang
,
Gabriel Kolle
,
Sean M. Grimmond
Bioinformatics
25
(19), 2009, pp. 2615-2616
Genoscape: A Cytoscape plug-in to automate the retrieval and integration of gene expression data and molecular networks
Mathieu Clément-Ziza
,
Christophe Malabat
,
Christian Weber
,
Ivan Moszer
,
Tero Aittokallio
,
Catherine Letondal
,
Sandrine Rousseau
Bioinformatics
25
(19), 2009, pp. 2617-2618
Erratum to ``Executing multicellular differentiation: Quantitative predictive modelling of C. elegans vulval development''
Nicola Bonzanni
,
Elzbieta Krepska
,
K. Anton Feenstra
,
Wan Fokkink
,
Thilo Kielmann
,
Henri Bal
,
Jaap Heringa
Bioinformatics
25
(19), 2009, pp. 2624-2624
TargetMiner: microRNA target prediction with systematic identification of tissue-specific negative examples
Sanghamitra Bandyopadhyay
,
Ramkrishna Mitra
Bioinformatics
25
(20), 2009, pp. 2625-2631
T-REKS: Identification of Tandem REpeats in sequences with a K-meanS based algorithm
Julien Jorda
,
Andrey V. Kajava
Bioinformatics
25
(20), 2009, pp. 2632-2638
Partition function and base pairing probabilities for RNA-RNA interaction prediction
Fenix W.D. Huang
,
Jing Qin
,
Christian M. Reidys
,
Peter F. Stadler
Bioinformatics
25
(20), 2009, pp. 2646-2654
A new taxonomy-based protein fold recognition approach based on autocross-covariance transformation
Qiwen Dong
,
Shuigeng Zhou
,
Jihong Guan
Bioinformatics
25
(20), 2009, pp. 2655-2662
info-gibbs: A motif discovery algorithm that directly optimizes information content during sampling
Matthieu Defrance
,
Jacques van Helden
Bioinformatics
25
(20), 2009, pp. 2715-2722
SnoopCGH: Software for visualizing comparative genomic hybridization data
Jacob Almagro-Garcia
,
Magnus Manske
,
Celine Carret
,
Susana Campino
,
Sarah Auburn
,
Bronwyn L. MacInnis
,
Gareth Maslen
,
Arnab Pain
,
Christopher I. Newbold
,
Dominic P. Kwiatkowski
,
Taane G. Clark
Bioinformatics
25
(20), 2009, pp. 2732-2733
YADA: A tool for taking the most out of high-resolution spectra
Paulo C. Carvalho
,
Tao Xu
,
Xuemei Han
,
Daniel Cociorva
,
Valmir C. Barbosa
,
John R. Yates III
Bioinformatics
25
(20), 2009, pp. 2734-2736
PiSQRD: A web server for decomposing proteins into quasi-rigid dynamical domains
T. Aleksiev
,
R. Potestio
,
F. Pontiggia
,
S. Cozzini
,
C. Micheletti
Bioinformatics
25
(20), 2009, pp. 2743-2744
ANCHOR: Web server for predicting protein binding regions in disordered proteins
Zsuzsanna Dosztányi
,
Bálint Mészáros
,
István Simon
Bioinformatics
25
(20), 2009, pp. 2745-2746
GRIMP: A web- and grid-based tool for high-speed analysis of large-scale genome-wide association using imputed data
Karol Estrada
,
Anis Abuseiris
,
Frank G. Grosveld
,
André G. Uitterlinden
,
Tobias A. Knoch
,
Fernando Rivadeneira
Bioinformatics
25
(20), 2009, pp. 2750-2752
FBA-SimVis: Interactive visualization of constraint-based metabolic models
Eva Grafahrend-Belau
,
Christian Klukas
,
Björn H. Junker
,
Falk Schreiber
Bioinformatics
25
(20), 2009, pp. 2755-2757
CCHMM\_PROF: A HMM-based coiled-coil predictor with evolutionary information
Lisa Bartoli
,
Piero Fariselli
,
Anders Krogh
,
Rita Casadio
Bioinformatics
25
(21), 2009, pp. 2757-2763
FRED - A framework for T-cell epitope detection
Magdalena Feldhahn
,
Pierre Dönnes
,
Philipp Thiel
,
Oliver Kohlbacher
Bioinformatics
25
(20), 2009, pp. 2758-2759
The effects of probe binding affinity differences on gene expression measurements and how to deal with them
Michael Dannemann
,
Anna Lorenc
,
Ines Hellmann
,
Philipp Khaitovich
,
Michael Lachmann
Bioinformatics
25
(21), 2009, pp. 2772-2779
Corrigendum to ``PathCase pathways database system''
Brendan Elliott
,
Mustafa Kirac
,
Ali Cakmak
,
Gokhan Yavas
,
Stephen Mayes
,
En Cheng
,
Yuan Wang
,
Chirag Gupta
,
Gultekin Ozsoyoglu
,
Zehra Meral Ozsoyoglu
Bioinformatics
25
(20), 2009, pp. 2773-2773
Statistical methods for gene set co-expression analysis
YounJeong Choi
,
Christina Kendziorski
Bioinformatics
25
(21), 2009, pp. 2780-2786
Bi-correlation clustering algorithm for determining a set of co-regulated genes
Anindya Bhattacharya
,
Rajat K. De
Bioinformatics
25
(21), 2009, pp. 2795-2801
Quantifying cancer progression with conjunctive Bayesian networks
Moritz Gerstung
,
Michael Baudis
,
Holger Moch
,
Niko Beerenwinkel
Bioinformatics
25
(21), 2009, pp. 2809-2815
COMPASS: A program for generating serial samples under an infinite sites model
Mattias Jakobsson
Bioinformatics
25
(21), 2009, pp. 2845-2847
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