Fakultät für Informatik
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Technische Universität München
Lehrstuhl für Effiziente Algorithmen
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TAMO: A flexible, object-oriented framework for analyzing transcriptional regulation using DNA-sequence motifs
D. Benjamin Gordon
,
Lena Nekludova
,
Scott McCallum
,
Ernest Fraenkel
Bioinformatics
21
(14), 2005, pp. 3164-3165
Dynamite extended: Two new services to simplify protein dynamic analysis
C. Paul Barrett
,
Martin E.M. Noble
Bioinformatics
21
(14), 2005, pp. 3174-3175
PMUT: A web-based tool for the annotation of pathological mutations on proteins
Carles Ferrer-Costa
,
Josep Lluis Gelpí
,
Leire Zamakola
,
Ivan Parraga
,
Xavier de la Cruz
,
Modesto Orozco
Bioinformatics
21
(14), 2005, pp. 3176-3178
HCPM - Program for hierarchical clustering of protein models
Dominik Gront
,
Andrzej Kolinski
Bioinformatics
21
(14), 2005, pp. 3179-3180
Computational cluster validation in post-genomic data analysis
Julia Handl
,
Joshua Knowles
,
Douglas B. Kell
Bioinformatics
21
(15), 2005, pp. 3201-3212
A quantitative determination of multi-protein interactions by the analysis of confocal images using a pixel-by-pixel assessment algorithm
D.R. Goucher
,
S.M. Wincovitch
,
S.H. Garfield
,
K.M. Carbone
,
T.H. Malik
Bioinformatics
21
(15), 2005, pp. 3248-3254
A latent variable model for chemogenomic profiling
Patrick Flaherty
,
Guri Giaever
,
Jochen Kumm
,
Michael I. Jordan
,
Adam P. Arkin
Bioinformatics
21
(15), 2005, pp. 3286-3293
Discovering patterns to extract protein-protein interactions from the literature: Part II
Yu Hao
,
Xiaoyan Zhu
,
Minlie Huang
,
Ming Li
Bioinformatics
21
(15), 2005, pp. 3294-3300
SECISDesign: A server to design SECIS-elements within the coding sequence
Anke Busch
,
Sebastian Will
,
Rolf Backofen
Bioinformatics
21
(15), 2005, pp. 3312-3313
Statistics of protein library construction
Andrew E. Firth
,
Wayne M. Patrick
Bioinformatics
21
(15), 2005, pp. 3314-3315
PROVAT: A tool for Voronoi tessellation analysis of protein structures and complexes
Swanand P. Gore
,
David F. Burke
,
Tom L. Blundell
Bioinformatics
21
(15), 2005, pp. 3316-3317
Efficient recognition of folds in protein 3D structures by the improved PRIDE algorithm
Zoltán Gáspári
,
Kristian Vlahovicek
,
Sándor Pongor
Bioinformatics
21
(15), 2005, pp. 3322-3323
MeSHer: Identifying biological concepts in microarray assays based on PubMed references and MeSH terms
Amira Djebbari
,
Svetlana Karamycheva
,
Eleanor Howe
,
John Quackenbush
Bioinformatics
21
(15), 2005, pp. 3324-3326
Quantifying optimal accuracy of local primary sequence bioinformatics methods
Daniel P. Aalberts
,
Eric G. Daub
,
Jesse W. Dill
Bioinformatics
21
(16), 2005, pp. 3347-3351
Prediction of protein-protein interactions using distant conservation of sequence patterns and structure relationships
Jordi Espadaler
,
Oriol Romero-Isart
,
Richard M. Jackson
,
Baldo Oliva
Bioinformatics
21
(16), 2005, pp. 3360-3368
Biomarker discovery in microarray gene expression data with Gaussian processes
Wei Chu
,
Zoubin Ghahramani
,
Francesco Falciani
,
David L. Wild
Bioinformatics
21
(16), 2005, pp. 3385-3393
ACT: The Artemis comparison tool
Tim J. Carver
,
Kim M. Rutherford
,
Matthew Berriman
,
Marie-Adele Rajandream
,
Barclay G. Barrell
,
Julian Parkhill
Bioinformatics
21
(16), 2005, pp. 3422-3423
DNA-BAR: Distinguisher selection for DNA barcoding
B. DasGupta
,
K.M. Konwar
,
I.I. Măndoiu
,
A.A. Shvartsman
Bioinformatics
21
(16), 2005, pp. 3424-3426
Sarment: Python modules for HMM analysis and partitioning of sequences
Laurent Guéguen
Bioinformatics
21
(16), 2005, pp. 3427-3428
IUPred: Web server for the prediction of intrinsically unstructured regions of proteins based on estimated energy content
Zsuzsanna Dosztányi
,
Veronika Csizmok
,
Peter Tompa
,
István Simon
Bioinformatics
21
(16), 2005, pp. 3433-3434
BioMart and Bioconductor: A powerful link between biological databases and microarray data analysis
Steffen Durinck
,
Yves Moreau
,
Arek Kasprzyk
,
Sean Davis
,
Bart De Moor
,
Alvis Brazma
,
Wolfgang Huber
Bioinformatics
21
(16), 2005, pp. 3439-3440
IRILmap: Linkage map distance correction for intermated recombinant inbred lines/advanced recombinant inbred strains
M. Falque
Bioinformatics
21
(16), 2005, pp. 3441-3442
MineBlast: A literature presentation service supporting protein annotation by data mining of BLAST results
Guido Dieterich
,
Uwe Kärst
,
Jürgen Wehland
,
Lothar Jänsch
Bioinformatics
21
(16), 2005, pp. 3450-3451
Discrimination of yeast genes involved in methionine and phosphate metabolism on the basis of upstream motifs
Didier Gonze
,
Sylvie Pinloche
,
Olivier Gascuel
,
Jacques van Helden
Bioinformatics
21
(17), 2005, pp. 3490-3500
A multicellular systems biology model predicts epidermal morphology, kinetics and Ca
^{2+}
flow
Niels Grabe
,
Karsten Neuber
Bioinformatics
21
(17), 2005, pp. 3541-3547
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