Fakultät für Informatik
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Technische Universität München
Lehrstuhl für Effiziente Algorithmen
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Suche: Booktitle=Proceedings of the 19th Annual International Conference on Intelligent Systems for Molecular Biology/10th European Conference on Computational Biology, ISMB'2011/ECCB'2011 (Vienna, Austria, July 17-19, 2011)
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Sorting the nuclear proteome
Denis C. Bauer
,
Kai Willadsen
,
Fabian A. Buske
,
Kim-Anh Lê Cao
,
Timothy L. Bailey
,
Graham Dellaire
,
Mikael Bodén
Bioinformatics
27
(13), 2011, pp. 7-14
Environment specific substitution tables improve membrane protein alignment
Jamie R. Hill
,
Sebastian Kelm
,
Jiye Shi
,
Charlotte M. Deane
Bioinformatics
27
(13), 2011, pp. 15-23
Sequence-based prediction of protein crystallization, purification and production propensity
Marcin J. Mizianty
,
Lukasz Kurgan
Bioinformatics
27
(13), 2011, pp. 24-33
A method for probing the mutational landscape of amyloid structure
Charles W. O'Donnell
,
Jérôme Waldispühl
,
Mieszko Lis
,
Randal Halfmann
,
Srinivas Devadas
,
Susan Lindquist
,
Bonnie Berger
Bioinformatics
27
(13), 2011, pp. 34-42
Piecewise linear approximation of protein structures using the principle of minimum message length
Arun S. Konagurthu
,
Lloyd Allison
,
Peter J. Stuckey
,
Arthur M. Lesk
Bioinformatics
27
(13), 2011, pp. 43-51
QAARM: Quasi-anharmonic autoregressive model reveals molecular recognition pathways in ubiquitin
Andrej J. Savol
,
Virginia M. Burger
,
Pratul K. Agarwal
,
Arvind Ramanathan
,
Chakra S. Chennubhotla
Bioinformatics
27
(13), 2011, pp. 52-60
Multi-view methods for protein structure comparison using latent dirichlet allocation
S. Shivashankar
,
S. Srivathsan
,
B. Ravindran
,
Ashish V. Tendulkar
Bioinformatics
27
(13), 2011, pp. 61-68
Template-free detection of macromolecular complexes in cryo electron tomograms
Min Xu
,
Martin Beck
,
Frank Alber
Bioinformatics
27
(13), 2011, pp. 69-76
vipR: Variant identification in pooled DNA using R
Andre Altmann
,
Peter Weber
,
Carina Quast
,
Monika Rex-Haffner
,
Elisabeth B. Binder
,
Bertram Müller-Myhsok
Bioinformatics
27
(13), 2011, pp. 77-84
IPknot: Fast and accurate prediction of RNA secondary structures with pseudoknots using integer programming
Kengo Sato
,
Yuki Kato
,
Michiaki Hamada
,
Tatsuya Akutsu
,
Kiyoshi Asai
Bioinformatics
27
(13), 2011, pp. 85-93
Meta-IDBA: A de Novo assembler for metagenomic data
Yu Peng
,
Henry C.M. Leung
,
S.M. Yiu
,
Francis Y.L. Chin
Bioinformatics
27
(13), 2011, pp. 94-101
A conditional random fields method for RNA sequence-structure relationship modeling and conformation sampling
Zhiyong Wang
,
Jinbo Xu
Bioinformatics
27
(13), 2011, pp. 102-110
Discovering and visualizing indirect associations between biomedical concepts
Yoshimasa Tsuruoka
,
Makoto Miwa
,
Kaisei Hamamoto
,
Jun'ichi Tsujii
,
Sophia Ananiadou
Bioinformatics
27
(13), 2011, pp. 111-119
MeSH: A window into full text for document summarization
Sanmitra Bhattacharya
,
Viet Ha-Thuc
,
Padmini Srinivasan
Bioinformatics
27
(13), 2011, pp. 120-128
A folding algorithm for extended RNA secondary structures
Christian Höner zu Siederdissen
,
Stephan H. Bernhart
,
Peter F. Stadler
,
Ivo L. Hofacker
Bioinformatics
27
(13), 2011, pp. 129-136
Error correction of high-throughput sequencing datasets with non-uniform coverage
Paul Medvedev
,
Eric Scott
,
Boyko Kakaradov
,
Pavel Pevzner
Bioinformatics
27
(13), 2011, pp. 137-141
Generative probabilistic models for protein-protein interaction networks - The biclique perspective
Regev Schweiger
,
Michal Linial
,
Nathan Linial
Bioinformatics
27
(13), 2011, pp. 142-148
RINQ: Reference-based Indexing for Network Queries
Günhan Gülsoy
,
Tamer Kahveci
Bioinformatics
27
(13), 2011, pp. 149-158
Construction of co-complex score matrix for protein complex prediction from AP-MS data
Zhipeng Xie
,
Chee Keong Kwoh
,
Xiao-Li Li
,
Min Wu
Bioinformatics
27
(13), 2011, pp. 159-166
Uncover disease genes by maximizing information flow in the phenome-interactome network
Yong Chen
,
Tao Jiang
,
Rui Jiang
Bioinformatics
27
(13), 2011, pp. 167-176
Physical Module Networks: An integrative approach for reconstructing transcription regulation
Noa Novershtern
,
Aviv Regev
,
Nir Friedman
Bioinformatics
27
(13), 2011, pp. 177-185
Identification of metabolic network models from incomplete high-throughput datasets
Sara Berthoumieux
,
Matteo Brilli
,
Hidde de Jong
,
Daniel Kahn
,
Eugenio Cinquemani
Bioinformatics
27
(13), 2011, pp. 186-195
TREEGL: Reverse engineering tree-evolving gene networks underlying developing biological lineages
Ankur P. Parikh
,
Wei Wu
,
Ross E. Curtis
,
Eric P. Xing
Bioinformatics
27
(13), 2011, pp. 196-204
Optimally discriminative subnetwork markers predict response to chemotherapy
Phuong Dao
,
Kendric Wang
,
Colin Collins
,
Martin Ester
,
Anna Lapuk
,
S. Cenk Sahinalp
Bioinformatics
27
(13), 2011, pp. 205-213
Epistasis detection on quantitative phenotypes by exhaustive enumeration using GPUs
Tony Kam-Thong
,
Benno Pütz
,
Nazanin Karbalai
,
Bertram Müller-Myhsok
,
Karsten Borgwardt
Bioinformatics
27
(13), 2011, pp. 214-221
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