Fakultät für Informatik
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Technische Universität München
Lehrstuhl für Effiziente Algorithmen
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Faster algorithms for computing the R
^\ast
consensus tree
Jesper Jansson
,
Wing-Kin Sung
,
Hoa Vu
,
Siu-Ming Yiu
Lecture Notes in Computer Science
8889
, 2014, pp. 414-425
SOAP3: Ultra-fast GPU-based parallel alignment tool for short reads
Chi-Man Liu
,
Thomas Wong
,
Edward Wu
,
Ruibang Luo
,
Siu-Ming Yiu
,
Yingrui Li
,
Bingqiang Wang
,
Chang Yu
,
Xiaowen Chu
,
Kaiyong Zhao
,
Ruiqiang Li
,
Tak-Wah Lam
Bioinformatics
28
(6), 2012, pp. 878-879
COPE: An accurate
k
-mer-based pair-end reads connection tool to facilitate genome assembly
Binghang Liu
,
Jianying Yuan
,
Siu-Ming Yiu
,
Zhenyu Li
,
Yinlong Xie
,
Yanxiang Chen
,
Yujian Shi
,
Hao Zhang
,
Yingrui Li
,
Tak-Wah Lam
,
Ruibang Luo
Bioinformatics
28
(22), 2012, pp. 2870-2874
RNASAlign: RNA Structural Alignment System
Thomas K.F. Wong
,
Kwok-Lung Wan
,
Bay-Yuan Hsu
,
Brenda W.Y. Cheung
,
Wing-Kai Hon
,
Tak-Wah Lam
,
Siu-Ming Yiu
Bioinformatics
27
(15), 2011, pp. 2151-2152
SOAP2: An improved ultrafast tool for short read alignment
Ruiqiang Li
,
Chang Yu
,
Yingrui Li
,
Tak-Wah Lam
,
Siu-Ming Yiu
,
Karsten Kristiansen
,
Jun Wang
Bioinformatics
25
(15), 2009, pp. 1966-1967
MotifVoter: A novel ensemble method for fine-grained integration of generic motif finders
Edward Wijaya
,
Siu-Ming Yiu
,
Ngo Thanh Son
,
Rajaraman Kanagasabai
,
Wing-Kin Sung
Bioinformatics
24
(20), 2008, pp. 2288-2295
A space and time efficient algorithm for constructing compressed suffix arrays
Wing-Kai Hon
,
Tak-Wah Lam
,
Kunihiko Sadakane
,
Wing-Kin Sung
,
Siu-Ming Yiu
Algorithmica
48
(1), 2007, pp. 23-36
Space efficient indexes for string matching with don't cares
Tak-Wah Lam
,
Wing-Kin Sung
,
Siu-Lung Tam
,
Siu-Ming Yiu
Lecture Notes in Computer Science
4835
, 2007, pp. 846-857
Detection of generic spaced motifs using submotif pattern mining
Edward Wijaya
,
Kanagasabai Rajaraman
,
Siu-Ming Yiu
,
Wing-Kin Sung
Bioinformatics
23
(12), 2007, pp. 1476-1485
Reconstructing an ultrametric galled phylogenetic network from a distance matrix
Ho-Leung Chan
,
Jesper Jansson
,
Tak-Wah Lam
,
Siu-Ming Yiu
Lecture Notes in Computer Science
3618
, 2005, pp. 224-235
Non-shared edges and nearest neighbor interchanges revisited
Wing-Kai Hon
,
Ming-Yang Kao
,
Tak-Wah Lam
,
Wing-Kin Sung
,
Siu-Ming Yiu
Information Processing Letters
91
(3), 2004, pp. 129-134
A space and time efficient algorithm for constructing compressed suffix arrays
Tak-Wah Lam
,
Kunihiko Sadakane
,
Wing-Kin Sung
,
Siu-Ming Yiu
Lecture Notes in Computer Science
2387
, 2002, pp. 401-410