Fakultät für Informatik
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Technische Universität München
Lehrstuhl für Effiziente Algorithmen
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GolgiP: Prediction of Golgi-resident proteins in plants
Wen-Chi Chou
,
Yanbin Yin
,
Ying Xu
Bioinformatics
26
(19), 2010, pp. 2464-2465
cBar: A computer program to distinguish plasmid-derived from chromosome-derived sequence fragments in metagenomics data
Fengfeng Zhou
,
Ying Xu
Bioinformatics
26
(16), 2010, pp. 2051-2052
De novo computational prediction of non-coding RNA genes in prokaryotic genomes
Thao T. Tran
,
Fengfeng Zhou
,
Sarah Marshburn
,
Mark Stead
,
Sidney R. Kushner
,
Ying Xu
Bioinformatics
25
(22), 2009, pp. 2897-2905
Computational prediction of human proteins that can be secreted into the bloodstream
Juan Cui
,
Qi Liu
,
David Puett
,
Ying Xu
Bioinformatics
24
(20), 2008, pp. 2370-2375
An algorithm for simultaneous backbone threading and side-chain packing
Guojun Li
,
Zhijie Liu
,
Jun-Tao Guo
,
Ying Xu
Algorithmica
51
(4), 2008, pp. 435-450
An algorithm for simultaneous backbone threading and side-chain packing
Guojun Li
,
Zhijie Liu
,
Jun-tao Guo
,
Ying Xu
Algorithmica
48
(4), 2007, pp. 329-342
Estimating sum by weighted sampling
Rajeev Motwani
,
Rina Panigrahy
,
Ying Xu
Lecture Notes in Computer Science
4596
, 2007, pp. 53-64
libSRES: A C library for stochastic ranking evolution strategy for parameter estimation
Xinglai Ji
,
Ying Xu
Bioinformatics
22
(1), 2006, pp. 124-126
Peptide sequence tag-based blind identification of post-translational modifications with point process model
Chunmei Liu
,
Bo Yan
,
Yinglei Song
,
Ying Xu
,
Liming Cai
Bioinformatics
22
(14), 2006, pp. 307-313
CSS-Palm: Palmitoylation site prediction with a clustering and scoring strategy (CSS)
Fengfeng Zhou
,
Yu Xue
,
Xuebiao Yao
,
Ying Xu
Bioinformatics
22
(7), 2006, pp. 894-896
MPSS: An integrated database system for surveying a set of proteins
Pei Hao
,
Wei-Zhong He
,
Yin Huang
,
Liang-Xiao Ma
,
Ying Xu
,
Hong Xi
,
Chuan Wang
,
Bo-Shu Liu
,
Jin-Miao Wang
,
Yi-Xue Li
,
Yang Zhong
Bioinformatics
21
(9), 2005, pp. 2142-2143
On connected
[g,f +1]
-factors in graphs
Guojun Li
,
Ying Xu
,
Chuanping Chen
,
Zhenhong Liu
Combinatorica
25
(4), 2005, pp. 393-405
Efficient parameterized algorithm for biopolymer structure-sequence alignment
Yinglei Song
,
Chunmei Liu
,
Xiuzhen Huang
,
Russell L. Malmberg
,
Ying Xu
,
Liming Cai
LNCS/LNBI
3692
, 2005, pp. 376-388
Exact matching of RNA secondary structure patterns
Ying Xu
,
Lusheng Wang
,
Hao Zhao
,
Jianping Li
Theoretical Computer Science
335
(1), 2005, pp. 53-66
A graph-theoretic approach for the separation of b and y ions in tandem mass spectra
Bo Yan
,
Chongle Pan
,
Victor N. Olman
,
Robert L. Hettich
,
Ying Xu
Bioinformatics
21
(5), 2005, pp. 563-574
Distributed computing paradigms for collaborative signal and information processing in sensor networks
Yingyue Xu
,
Hairong Qi
Journal Parallel Distributed Computing
64
(8), 2004, pp. 945-959
More reliable protein NMR peak assignment via improved 2-interval scheduling
Zhi-Zhong Chen
,
Tao Jiang
,
Guohui Lin
,
Romeo Rizzi
,
Jianjun Wen
,
Dong Xu
,
Ying Xu
Lecture Notes in Computer Science
2832
, 2003, pp. 580-592
Approximation algorithms for NMR spectral peak assignment
Zhi-Zhong Chen
,
Tao Jiang
,
Guohui Lin
,
Jianjun Wen
,
Dong Xu
,
Jinbo Xu
,
Ying Xu
Theoretical Computer Science
299
(1-3), 2003, pp. 211-229
A computational pipeline for protein structure prediction and analysis at genome scale
Manesh Shah
,
Sergei Passovets
,
Dongsup Kim
,
Kyle Ellrott
,
Li Wang
,
Inna Vokler
,
Philip LoCascio
,
Dong Xu
,
Ying Xu
Bioinformatics
19
(15), 2003, pp. 1985-1996
SEGID: Identifying Interesting Segments in (Multiple) Sequence Alignments
Lusheng Wang
,
Ying Xu
Bioinformatics
19
(2), 2003, pp. 297-298
Haplotype inference by maximum parsimony
Lusheng Wang
,
Ying Xu
Bioinformatics
19
(14), 2003, pp. 1773-1780
An
O(n^{1.5})
deterministic gossiping algorithm for radio networks
Ying Xu
Algorithmica
36
(1), 2003, pp. 93-96
Greedy method for inferring tandem duplication history
Louxin Zhang
,
Bin Ma
,
Lusheng Wang
,
Ying Xu
Bioinformatics
19
(12), 2003, pp. 1497-1504
Computational methods for protein folding: Scaling a hierarchy of complexities
Hue Sun Chan
,
Hüseyin Kaya
,
Seishi Shimizu
Computational Molecular Biology
, 2002, pp. 403-447
Computational methods for protein folding: Scaling a hierarchy of complexities
Hue Sun Chan
,
Hüseyin Kaya
,
Seishi Shimizu
Computer Molecular Biology
, 2002, pp. 403-447
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