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Technische Universität München
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Artemis: An integrated platform for visualization and analysis of high-throughput sequence-based experimental data
Tim Carver
,
Simon R. Harris
,
Matthew Berriman
,
Julian Parkhill
,
Jacqueline A. McQuillan
Bioinformatics
28
(4), 2012, pp. 464-469
SpolPred: Rapid and accurate prediction of Mycobacterium tuberculosis spoligotypes from short genomic sequences
Francesc Coll
,
Kim Mallard
,
Mark D. Preston
,
Stephen Bentley
,
Julian Parkhill
,
Ruth McNerney
,
Nigel Martin
,
Taane G. Clark
Bioinformatics
28
(22), 2012, pp. 2991-2993
BamView: Viewing mapped read alignment data in the context of the reference sequence
Tim Carver
,
Ulrike Böhme
,
Thomas D. Otto
,
Julian Parkhill
,
Matthew Berriman
Bioinformatics
26
(5), 2010, pp. 676-677
DNAPlotter: Circular and linear interactive genome visualization
Tim Carver
,
Nick Thomson
,
Alan Bleasby
,
Matthew Berriman
,
Julian Parkhill
Bioinformatics
25
(1), 2009, pp. 119-120
Detecting SNPs and estimating allele frequencies in clonal bacterial populations by sequencing pooled DNA
Kathryn E. Holt
,
Yik Y. Teo
,
Heng Li
,
Satheesh Nair
,
Gordon Dougan
,
John Wain
,
Julian Parkhill
Bioinformatics
25
(16), 2009, pp. 2074-2075
Artemis and ACT: Viewing, annotating and comparing sequences stored in a relational database
Tim Carver
,
Matthew Berriman
,
Adrian Tivey
,
Chinmay Patel
,
Ulrike Böhme
,
Barclay G. Barrell
,
Julian Parkhill
,
Marie-Adèle Rajandream
Bioinformatics
24
(23), 2008, pp. 2672-2676
Interpolated variable order motifs for identification of horizontally acquired DNA: Revisiting the Salmonella pathogenicity islands
Georgios S. Vernikos
,
Julian Parkhill
Bioinformatics
22
(18), 2006, pp. 2196-2203
ACT: The Artemis comparison tool
Tim J. Carver
,
Kim M. Rutherford
,
Matthew Berriman
,
Marie-Adele Rajandream
,
Barclay G. Barrell
,
Julian Parkhill
Bioinformatics
21
(16), 2005, pp. 3422-3423
Artemis: Sequence visualization and annotation
Kim Rutherford
,
Julian Parkhill
,
James Crook
,
Terry Horsnell
,
Peter Rice
,
Marie-Adèle Rajandream
,
Bart Barrell
Bioinformatics
16
(10), 2000, pp. 944-945