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Technische Universität München
Lehrstuhl für Effiziente Algorithmen
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Improving HIV coreceptor usage prediction in the clinic using hints from next-generation sequencing data
Nico Pfeifer
,
Thomas Lengauer
Bioinformatics
28
(18), 2012, pp. 589-595
Paving the future: Finding suitable ISMB venues
Burkhard Rost
,
Terry Gaasterland
,
Thomas Lengauer
,
Michal Linial
,
Scott Markel
,
B.J. Morrison McKay
,
Reinhard Schneider
,
Paul Horton
,
Janet Kelso
Bioinformatics
28
(19), 2012, pp. 2556-2559
Permutation importance: A corrected feature importance measure
André Altmann
,
Laura Toloşi
,
Oliver Sander
,
Thomas Lengauer
Bioinformatics
26
(10), 2010, pp. 1340-1347
Dealing with sparse data in predicting outcomes of HIV combination therapies
Jasmina Bogojeska
,
Steffen Bickel
,
André Altmann
,
Thomas Lengauer
Bioinformatics
26
(17), 2010, pp. 2085-2092
Improving disease gene prioritization using the semantic similarity of Gene Ontology terms
Andreas Schlicker
,
Thomas Lengauer
,
Mario Albrecht
Bioinformatics
26
(18), 2010, pp. 561-567
DASMI: Exchanging, annotating and assessing molecular interaction data
Hagen Blankenburg
,
Robert D. Finn
,
Andreas Prlić
,
Andrew M. Jenkinson
,
Fidel Ramírez
,
Dorothea Emig
,
Sven-Eric Schelhorn
,
Joachim Büch
,
Thomas Lengauer
,
Mario Albrecht
Bioinformatics
25
(10), 2009, pp. 1321-1328
Computing topological parameters of biological networks
Yassen Assenov
,
Fidel Ramírez
,
Sven-Eric Schelhorn
,
Thomas Lengauer
,
Mario Albrecht
Bioinformatics
24
(2), 2008, pp. 282-284
Computational epigenetics
Christoph Bock
,
Thomas Lengauer
Bioinformatics
24
(1), 2008, pp. 1-10
Rtreemix: An R package for estimating evolutionary pathways and genetic progression scores
Jasmina Bogojeska
,
Adrian Alexa
,
André Altmann
,
Thomas Lengauer
,
Jörg Rahnenführer
Bioinformatics
24
(20), 2008, pp. 2391-2392
Integrating expression data with domain interaction networks
Dorothea Emig
,
Melissa S. Cline
,
Thomas Lengauer
,
Mario Albrecht
Bioinformatics
24
(21), 2008, pp. 2546-2548
Selecting anti-HIV therapies based on a variety of genomic and clinical factors
Michal Rosen-Zvi
,
Andre Altmann
,
Mattia Prosperi
,
Ehud Aharoni
,
Hani Neuvirth
,
Anders Sönnerborg
,
Eugen Schülter
,
Daniel Struck
,
Yardena Peres
,
Francesca Incardona
,
Rolf Kaiser
,
Maurizio Zazzi
,
Thomas Lengauer
Bioinformatics
24
(13), 2008, pp. 399-406
An integrative approach for predicting interactions of protein regions
Sven-Eric Schelhorn
,
Thomas Lengauer
,
Mario Albrecht
Bioinformatics
24
(16), 2008, pp. 35-41
Conformational analysis of alternative protein structures
Francisco S. Domingues
,
Jörg Rahnenführer
,
Thomas Lengauer
Bioinformatics
23
(23), 2007, pp. 3131-3138
Functional evaluation of domain-domain interactions and human protein interaction networks
Andreas Schlicker
,
Carola Huthmacher
,
Fidel Ramírez
,
Thomas Lengauer
,
Mario Albrecht
Bioinformatics
23
(7), 2007, pp. 859-865
Moment invariants as shape recognition technique for comparing protein binding sites
Ingolf Sommer
,
Oliver Müller
,
Francisco S. Domingues
,
Oliver Sander
,
Joachim Weickert
,
Thomas Lengauer
Bioinformatics
23
(23), 2007, pp. 3139-3146
Improved scoring of functional groups from gene expression data by decorrelating GO graph structure
Adrian Alexa
,
Jörg Rahnenführer
,
Thomas Lengauer
Bioinformatics
22
(13), 2006, pp. 1600-1607
DynaPred: A structure and sequence based method for the prediction of MHC class I binding peptide sequences and conformations
Iris Antes
,
Shirley W.I. Siu
,
Thomas Lengauer
Bioinformatics
22
(14), 2006, pp. 16-24
Computational recognition of potassium channel sequences
Burkhard Heil
,
Jost Ludwig
,
Hella Lichtenberg-Fraté
,
Thomas Lengauer
Bioinformatics
22
(13), 2006, pp. 1562-1568
Recco: Recombination analysis using cost optimization
Jochen Maydt
,
Thomas Lengauer
Bioinformatics
22
(9), 2006, pp. 1064-1071
Decomposing protein networks into domain-domain interactions
Mario Albrecht
,
Carola Huthmacher
,
Silvio C.E. Tosatto
,
Thomas Lengauer
Bioinformatics
21
(S2), 2005, pp. 220-221
Mtreemix: A software package for learning and using mixture models of mutagenetic trees
Niko Beerenwinkel
,
Jörg Rahnenführer
,
Rolf Kaiser
,
Daniel Hoffmann
,
Joachim Selbig
,
Thomas Lengauer
Bioinformatics
21
(9), 2005, pp. 2106-2107
Computational methods for the design of effective therapies against drug resistant HIV strains
Niko Beerenwinkel
,
Tobias Sing
,
Thomas Lengauer
,
Jörg Rahnenführer
,
Kirsten Roomp
,
Igor Savenkov
,
Roman Fischer
,
Daniel Hoffmann
,
Joachim Selbig
,
Klaus Korn
,
Hauke Walter
,
Thomas Berg
,
Patrick Braun
,
Gerd Fätkenheuer
,
Mark Oette
,
Jürgen Rockstroh
,
Bernd Kupfer
,
Rolf Kaiser
,
Martin Däumer
Bioinformatics
21
(21), 2005, pp. 3943-3950
BiQ Analyzer: Visualization and quality control for DNA methylation data from bisulfite sequencing
Christoph Bock
,
Sabine Reither
,
Thomas Mikeska
,
Martina Paulsen
,
Jörn Walter
,
Thomas Lengauer
Bioinformatics
21
(21), 2005, pp. 4067-4068
Estimating cancer survival and clinical outcome based on genetic tumor progression scores
Jörg Rahnenführer
,
Niko Beerenwinkel
,
Wolfgang A. Schulz
,
Christian Hartmann
,
Andreas von Deimling
,
Bernd Wullich
,
Thomas Lengauer
Bioinformatics
21
(10), 2005, pp. 2438-2446
ROCR: Visualizing classifier performance in R
Tobias Sing
,
Oliver Sander
,
Niko Beerenwinkel
,
Thomas Lengauer
Bioinformatics
21
(20), 2005, pp. 3940-3941
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