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Technische Universität München
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Optimizing neural networks on SIMD parallel computers
Andrea Di Blas
,
Arun Jagota
,
Richard Hughey
Parallel Computing
31
(1), 2005, pp. 97-115
Calibrating
E
-values for hidden Markov models using reverse-sequence null models
Kevin Karplus
,
Rachel Karchin
,
George Shackelford
,
Richard Hughey
Bioinformatics
21
(22), 2005, pp. 4107-4115
Predicting reliable regions in protein sequence alignments
Melissa Cline
,
Richard Hughey
,
Kevin Karplus
Bioinformatics
18
(2), 2002, pp. 306-314
Optimizing reduced-space sequence analysis
Raymond Wheeler
,
Richard Hughey
Bioinformatics
16
(12), 2000, pp. 1082-1090
Parallel sequence alignment in limited space
J. Alicia Grice
,
Richard Hughey
,
Don Speck
Proceedings of the 3rd International Conference on Intelligent Systems for Molecular Biology, ISMB'95 (Cambridge, England, July 16-19, 1995)
, 1995, pp. 145-153
RNA modeling using Gibbs sampling and stochastic context free grammars
Leslie Grate
,
Mark Herbster
,
Richard Hughey
,
David Haussler
,
I. Saira Mian
,
Harry Noller
Proceedings of the 2nd International Conference on Intelligent Systems for Molecular Biology, ISMB'94 (Stanford, CA, USA, August 14-17, 1994)
, 1994, pp. 138-146
Recent methods for RNA modeling using stochastic context-free grammars
Yasubumi Sakakibara
,
Michael Brown
,
Richard Hughey
,
I. Saira Mian
,
Kimmen Sjölander
,
Rebecca C. Underwood
,
David Haussler
Lecture Notes in Computer Science
807
, 1994, pp. 289-306
Using Dirichlet mixture priors to derive hidden Markov models for protein families
Michael Brown
,
Richard Hughey
,
Anders Krogh
,
I. Saira Mian
,
Kimmen Sjölander
,
David Haussler
Proceedings of the 1st International Conference on Intelligent Systems for Molecular Biology, ISMB'93 (Bethesda, MD, USA, July 6-9, 1993)
, 1993, pp. 47-55
B-SYS: A 470-processor programmable systolic array
Richard Hughey
,
Daniel P. Lopresti
Proceedings of the 1991 International Conference on Parallel Processing. Vol.~I Architecture, ICPP'91 (St.~Charles, IL, August 12-17, 1991)
, 1991, pp. 580-583