Fakultät für Informatik
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Technische Universität München
Lehrstuhl für Effiziente Algorithmen
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A probabilistic model for sequence alignment with context-sensitive indels
Glenn Hickey
,
Mathieu Blanchette
LNCS/LNBI
6577
, 2011, pp. 85-103
Predicting site-specific human selective pressure using evolutionary signatures
Javad Sadri
,
Abdoulaye Banire Diallo
,
Mathieu Blanchette
Bioinformatics
27
(13), 2011, pp. 266-274
Ancestors 1.0: A web server for ancestral sequence reconstruction
Abdoulaye Banire Diallo
,
Vladimir Makarenkov
,
Mathieu Blanchette
Bioinformatics
26
(1), 2010, pp. 130-131
Mapping association between long-range cis-regulatory regions and their target genes using comparative genomics
Emmanuel Mongin
,
Ken Dewar
,
Mathieu Blanchette
LNCS/LNBI
6398
, 2010, pp. 216-227
Detection of locally over-represented GO terms in protein-protein interaction networks
Mathieu Lavallée-Adam
,
Benoit Coulombe
,
Mathieu Blanchette
LNCS/LNBI
5541
, 2009, pp. 302-320
An evolutionary study of the human papillomavirus genomes
Dunarel Badescu
,
Abdoulaye Baniré Diallo
,
Mathieu Blanchette
,
Vladimir Makarenkov
LNCS/LNBI
5267
, 2008, pp. 128-142
A phylogenetic approach to genetic map refinement
Denis Bertrand
,
Mathieu Blanchette
,
Nadia El-Mabrouk
LNCS/LNBI
5267
, 2008, pp. 198-210
Seeder: Discriminative seeding DNA motif discovery
François Fauteux
,
Mathieu Blanchette
,
Martina V. Strömvik
Bioinformatics
24
(20), 2008, pp. 2303-2307
Common substrings in random strings
Eric Blais
,
Mathieu Blanchette
Lecture Notes in Computer Science
4009
, 2006, pp. 129-140
Inferring gene orders from gene maps using the breakpoint distance
Guillaume Blin
,
Eric Blais
,
Pierre Guillon
,
Mathieu Blanchette
,
Nadia El-Mabrouk
LNCS/LNBI
4205
, 2006, pp. 99-112
Finding maximum likelihood indel scenarios
Abdoulaye Baniré Diallo
,
Vladimir Makarenkov
,
Mathieu Blanchette
LNCS/LNBI
4205
, 2006, pp. 171-185
Ordering partially assembled genomes using gene arrangements
Éric Gaul
,
Mathieu Blanchette
LNCS/LNBI
4205
, 2006, pp. 113-128
Into the heart of darkness: Large-scale clustering of human non-coding DNA
Gill Bejerano
,
David Haussler
,
Mathieu Blanchette
Bioinformatics
20
(S1), 2004, pp. 40-48
A comparative analysis method for detecting binding sites in coding regions
Mathieu Blanchette
Proceedings of the 7th Annual International Conference on Research in Computational Molecular Biology, RECOMB'2003 (Berlin, Germany, April 10-13, 2003)
, 2003, pp. 57-66
Separating real motifs from their artifacts
Mathieu Blanchette
,
Saurabh Sinha
Bioinformatics
17
(S1), 2001, pp. 30-38
An exact algorithm to identify motifs in orthologous sequences from multiple species
Mathieu Blanchette
,
Benno Schwikowski
,
Martin Tompa
Proceedings of the 8th International Conference on Intelligent Systems for Molecular Biology, ISMB'2000 (La Jolla, California, August 16-23, 2000)
, 2000, pp. 37-45
Probability models for genome rearrangement and linear invariants for phylogenetic inference
David Sankoff
,
Mathieu Blanchette
Proceedings of the 3rd Annual International Conference on Computational Molecular Biology, RECOMB'99 (Lyon, France, April 11-14, 1999)
, 1999, pp. 302-309
Multiple genome rearrangement
David Sankoff
,
Mathieu Blanchette
Proceedings of the 2nd Annual International Conference on Computational Molecular Biology, RECOMB'98 (New York, New York, March 22-25, 1998)
, 1998, pp. 243-247
The median problem for breakpoints in comparative genomics
David Sankoff
,
Mathieu Blanchette
Lecture Notes in Computer Science
1276
, 1997, pp. 251-263
Algorithms for phylogenetic footprinting
Mathieu Blanchette
Proceedings of the 5th Annual International Conference on Computational Molecular Biology, RECOMB'2001 (Montreal, Canada, April 22-25, 2001)
, pp. 49-58