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Technische Universität München
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ProDy: Protein Dynamics Inferred from Theory and Experiments
Ahmet Bakan
,
Lidio M. Meireles
,
Ivet Bahar
Bioinformatics
27
(11), 2011, pp. 1575-1577
Principal component analysis of native ensembles of biomolecular structures (PCA\_NEST): Insights into functional dynamics
Lee-Wei Yang
,
Eran Eyal
,
Ivet Bahar
,
Akio Kitao
Bioinformatics
25
(5), 2009, pp. 606-614
Erratum to ``Principal component analysis of native ensembles of biomolecular structures (PCA\_NEST): Insights into functional dynamics''
Lee-Wei Yang
,
Eran Eyal
,
Ivet Bahar
,
Akio Kitao
Bioinformatics
25
(16), 2009, pp. 2147-2147
Analysis of correlated mutations in HIV-1 protease using spectral clustering
Ying Liu
,
Eran Eyal
,
Ivet Bahar
Bioinformatics
24
(10), 2008, pp. 1243-1250
Anisotropic fluctuations of amino acids in protein structures: Insights from X-ray crystallography and elastic network models
Eran Eyal
,
Chakra Chennubhotla
,
Lee-Wei Yang
,
Ivet Bahar
Bioinformatics
23
(13), 2007, pp. 175-184
Rapid assessment of correlated amino acids from pair-to-pair (P2P) substitution matrices
Eran Eyal
,
Shmuel Pietrokovski
,
Ivet Bahar
Bioinformatics
23
(14), 2007, pp. 1837-1839
Markov methods for hierarchical coarse-graining of large protein dynamics
Chakra Chennubhotla
,
Ivet Bahar
LNCS/LNBI
3909
, 2006, pp. 379-393
Anisotropic network model: Systematic evaluation and a new web interface
Eran Eyal
,
Lee-Wei Yang
,
Ivet Bahar
Bioinformatics
22
(21), 2006, pp. 2619-2627
iGNM: A database of protein functional motions based on Gaussian Network Model
Lee-Wei Yang
,
Xiong Liu
,
Christopher J. Jursa
,
Mark Holliman
,
A.J. Rader
,
Hassan A. Karimi
,
Ivet Bahar
Bioinformatics
21
(13), 2005, pp. 2978-2987
Mining frequent patterns in protein structures: A study of protease families
Shann-Ching Chen
,
Ivet Bahar
Bioinformatics
20
(S1), 2004, pp. 77-85