Fakultät für Informatik
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Technische Universität München
Lehrstuhl für Effiziente Algorithmen
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Parallel globally optimal structure learning of Bayesian networks
Olga Nikolova
,
Jaroslaw Zola
,
Srinivas Aluru
Journal Parallel Distributed Computing
73
(8), 2013, pp. 1039-1048
All-pairs computations on many-core graphics processors
Abhinav Sarje
,
Srinivas Aluru
Parallel Computing
39
(2), 2013, pp. 79-93
A scalable parallelization of the gene duplication problem
André Wehe
,
Wen-Chieh Chang
,
Oliver Eulenstein
,
Srinivas Aluru
Journal Parallel Distributed Computing
70
(3), 2010, pp. 237-244
Reptile: Representative tiling for short read error correction
Xiao Yang
,
Karin S. Dorman
,
Srinivas Aluru
Bioinformatics
26
(20), 2010, pp. 2526-2533
The combinatorics of sequencing the corn genome
Srinivas Aluru
Lecture Notes in Computer Science
4598
, 2007, pp. 1-1
Obtaining provably good performance from suffix trees in secondary storage
Pang Ko
,
Srinivas Aluru
Lecture Notes in Computer Science
4009
, 2006, pp. 72-83
Efficient parallel algorithms and software for compressed octrees with applications to hierarchical methods
Bhanu Hariharan
,
Srinivas Aluru
Parallel Computing
31
(3-4), 2005, pp. 311-331
An optimal hierarchical clustering algorithm for gene expression data
Sudip Seal
,
Srikanth Komarina
,
Srinivas Aluru
Information Processing Letters
93
(3), 2005, pp. 143-147
Parallel algorithms for tree accumulations
Fatih E. Sevilgen
,
Srinivas Aluru
,
Natsuhiko Futamura
Journal Parallel Distributed Computing
65
(1), 2005, pp. 85-93
A strategy for assembling the maize (Zea mays L.) genome
Scott J. Emrich
,
Srinivas Aluru
,
Yan Fu
,
Tsui-Jung Wen
,
Mahesh Narayanan
,
Ling Guo
,
Daniel A. Ashlock
,
Patrick S. Schnable
Bioinformatics
20
(2), 2004, pp. 140-147
Space and time optimal parallel sequence alignments
Stjepan Rajko
,
Srinivas Aluru
IEEE Transactions on Parallel and Distributed Systems
15
(12), 2004, pp. 1070-1081
Parallel biological sequence comparison using prefix computations
Srinivas Aluru
,
Natsuhiko Futamura
,
Kishan Mehrotra
Journal Parallel Distributed Computing
63
(3), 2003, pp. 264-272
Parallel syntenic alignments
Natsuhiko Futamura
,
Srinivas Aluru
,
Xiaoqiu Huang
Parallel Processing Letters
13
(4), 2003, pp. 689-703
Space and time efficient parallel algorithms and software for EST clustering
Anantharaman Kalyanaraman
,
Srinivas Aluru
,
Volker Brendel
,
Suresh Kothari
IEEE Transactions on Parallel and Distributed Systems
14
(12), 2003, pp. 1209-1221
Space efficient linear time construction of suffix arrays
Pang Ko
,
Srinivas Aluru
Lecture Notes in Computer Science
2676
, 2003, pp. 200-210
Efficient parallel algorithms for solvent accessible surface area of proteins
Natsuhiko Futamura
,
Srinivas Aluru
,
Desh Ranjan
,
Bhanu Hariharan
IEEE Transactions on Parallel and Distributed Systems
13
(6), 2002, pp. 544-555
Parallel construction of multidimensional binary search trees
Ibraheem Al-furaih
,
Srinivas Aluru
,
Sanjay Goil
,
Sanjay Ranka
IEEE Transactions on Parallel and Distributed Systems
11
(2), 2000, pp. 136-148
Parallel biological sequence comparison using prefix computations
Srinivas Aluru
,
Natsuhiko Futamura
,
Kishan Mehrotra
Proceedings of the 13th International Parallel Processing Symposium and 10th Symposium on Parallel and Distributed Processing, IPPS/SPDP'99 (San Juan, Puerto Rico, April 12-16, 1999)
, 1999, pp. 653-659
Dynamic compressed hyperoctrees with application to the
N
-body problem
Srinivas Aluru
,
Fatih E. Sevilgen
Lecture Notes in Computer Science
1738
, 1999, pp. 21-33
Practical algorithms for selection on coarse-grained parallel computers
Ibraheem Al-furiah
,
Srinivas Aluru
,
Sanjay Goil
,
Sanjay Ranka
IEEE Transactions on Parallel and Distributed Systems
8
(8), 1997, pp. 813-824
Lagged Fibonacci random number generators for distributed memory parallel computers
Srinivas Aluru
Journal Parallel Distributed Computing
45
(1), 1997, pp. 1-12
Concatenated parallelism: A technique for efficient parallel divide and conquer
Sanjay Goil
,
Srinivas Aluru
,
Sanjay Ranka
Proceedings of the 8th IEEE Symposium on Parallel and Distributed Processing, SPDP'96 (New Orleans, Louisiana, October 23-26, 1996)
, 1996, pp. 488-495
Properties of binomial coefficients and implications to parallelizing lagged Fibonacci random number generators
Srinivas Aluru
Proceedings of the 1995 International Conference on Parallel Processing. Vol.~III Algorithms and Applications (Oconomowoc, Wisconsin, August 14-18, 1995)
, 1995, pp. 25-28
A random number generator for parallel computers
Srinivas Aluru
,
G.M. Prabhu
,
John Gustafson
Parallel Computing
18
(8), 1992, pp. 839-847